RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PACSIN3Q9UKS6 424 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 PCDHB11Q9Y5F2 797 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 HDAC3O15379 428 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 IZUMO2Q6UXV1 221 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 EEF1AKMT1Q8WVE0 214 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 APOOQ9BUR5 198 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 LHX3Q9UBR4 397 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 TRIM24O15164 1050 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 B3GALT2O43825 422 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 OR1I1O60431 355 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 KCNJ13O60928 360 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 KCNH1O95259 989 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 IL4RP24394 825 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 IRF9Q00978 393 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 LSM12Q3MHD2 195 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 POMZP3Q6PJE2 187 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CASP12Q6UXS9 341 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 Q6ZSR6 202 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 DCP2Q8IU60 420 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CYP4Z2PQ8N1L4 340 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 FGF14Q92915 247 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 UHRF1Q96T88 793 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 DPYSL5Q9BPU6 564 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 C1orf50Q9BV19 199 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 TAC3Q9UHF0 121 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 POLR3HQ9Y535 204 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 MTCH2Q9Y6C9 303 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CNOT3O75175 753 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 ARMCX4Q5H9R4 360 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 ZBTB49Q6ZSB9 765 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 LRRC70Q7Z2Q7 622 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 PIM3Q86V86 326 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 SYNPOQ8N3V7 929 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 MIEF2Q96C03 454 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 RMI1Q9H9A7 625 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 SSU72Q9NP77 194 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 KIAA0100Q14667 2235 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CXorf49A8MYA2 514 aaPredicted RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 RBM20Q5T481 1227 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 ANXA8L1Q5VT79 327 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 ZC3H7AQ8IWR0 971 aaKnown RBP12.62□□□□□ -0.39
PTCH1-207ENST00000429896 NELL1Q92832 810 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 MAT2BQ9NZL9 334 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 CDC14AQ9UNH5 594 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
PTCH1-207ENST00000429896 K7EPI3 171 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 MRASO14807 208 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 CALB2P22676 271 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 RAPSNQ13702 412 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 IL37Q9NZH6 218 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 PLAGL1Q9UM63 463 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 A0A1B0GW55 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L2P0CJ85 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L3P0CJ86 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L4P0CJ87 422 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L5P0CJ88 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L6P0CJ89 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4L7P0CJ90 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 TYRP1P17643 537 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 OR9A1PQ8NGU1 263 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 GRIP2Q9C0E4 1043 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 KLHL4Q9C0H6 718 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 LRTM1Q9HBL6 345 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 GALNT8Q9NY28 637 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DUX4Q9UBX2 424 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 SNX7Q9UNH6 387 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 KERAO60938 352 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 VARSP26640 1264 aaKnown RBP12.61□□□□□ -0.39
PTCH1-207ENST00000429896 PTPN4P29074 926 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 GPX6P59796 221 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ABHD13Q7L211 337 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 SLC44A3Q8N4M1 653 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 POPDC3Q9HBV1 291 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DKK3Q9UBP4 350 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 COL11A1P12107 1806 aaPredicted RBP12.61□□□□□ -0.39
PTCH1-207ENST00000429896 SNTNA6NMZ2 147 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 FCHO1O14526 889 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 SDC3O75056 442 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ZMPSTE24O75844 475 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ST13P50502 369 aaKnown RBP12.61□□□□□ -0.39
PTCH1-207ENST00000429896 MINDY4Q4G0A6 757 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 OR2A12Q8NGT7 310 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ZDHHC1Q8WTX9 485 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 GDF15Q99988 308 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DERL2Q9GZP9 239 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DCNP07585 359 aaKnown RBP12.61□□□□□ -0.39
PTCH1-207ENST00000429896 UROSP10746 265 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ALOX12P18054 663 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 PDZK1Q5T2W1 519 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 CNTD1Q8N815 330 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 APOLD1Q96LR9 279 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms