RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 COLEC12Q5KU26 742 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 DENND6AQ8IWF6 608 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 AGGF1Q8N302 714 aaeCLIP21.15■□□□□ 0.98
TRAF4-204ENST00000422344 OR1L3Q8NH93 324 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 MAGEC3Q8TD91 643 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 CT55Q8WUE5 264 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 MR1Q95460 341 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 CLIP3Q96DZ5 547 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 FBXO6Q9NRD1 293 aaPredicted RBP21.15■□□□□ 0.98
TRAF4-204ENST00000422344 GEMIN8Q9NWZ8 242 aaKnown RBP21.15■□□□□ 0.98
TRAF4-204ENST00000422344 RNF14Q9UBS8 474 aa21.15■□□□□ 0.98
TRAF4-204ENST00000422344 MRPS18BQ9Y676 258 aaKnown RBP21.15■□□□□ 0.98
TRAF4-204ENST00000422344 C21orf140B9A014 251 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 RASGRF2O14827 1237 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 ATP5DP30049 168 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 SLC1A2P43004 574 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 BDKRB1P46663 353 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 ITGA1P56199 1179 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 TTLL9Q3SXZ7 439 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 ZNF789Q5FWF6 425 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 CDHR3Q6ZTQ4 885 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 TAX1BP1Q86VP1 789 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 GPR135Q8IZ08 494 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 C2orf73Q8N5S3 287 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-204ENST00000422344 OR2L8Q8NGY9 312 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 IL17FQ96PD4 163 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 NAT9Q9BTE0 207 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.14■□□□□ 0.97
TRAF4-204ENST00000422344 RUVBL2Q9Y230 463 aaKnown RBP21.14■□□□□ 0.97
TRAF4-204ENST00000422344 NFS1Q9Y697 457 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 FAM169AQ9Y6X4 670 aa21.14■□□□□ 0.97
TRAF4-204ENST00000422344 E7EQ34 232 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 C1orf105O95561 183 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 TTC4O95801 387 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 F8A1P23610 371 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 CCR10P46092 362 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 TLE1Q04724 770 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 DHX9Q08211 1270 aaKnown RBP21.13■□□□□ 0.97
TRAF4-204ENST00000422344 CRYMQ14894 314 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 MORF4L2Q15014 288 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 BBS9Q3SYG4 887 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 HSP90AA5PQ58FG0 334 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 KCNMB4Q86W47 210 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 PDIK1LQ8N165 341 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 EBNA1BP2Q99848 306 aaKnown RBP21.13■□□□□ 0.97
TRAF4-204ENST00000422344 ACTR5Q9H9F9 607 aaPredicted RBP21.13■□□□□ 0.97
TRAF4-204ENST00000422344 IRAK4Q9NWZ3 460 aa21.13■□□□□ 0.97
TRAF4-204ENST00000422344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
TRAF4-204ENST00000422344 SMAPO00193 183 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 PEBP1P30086 187 aaKnown RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 RPS15P62841 145 aaKnown RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 SRSF1Q07955 248 aaKnown RBP eCLIP21.12■□□□□ 0.971e-7■■■■□ 23.8
TRAF4-204ENST00000422344 GPS2Q13227 327 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 GRB7Q14451 532 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 CRTC2Q53ET0 693 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 SPANXN3Q5MJ09 141 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 PRAMEF17Q5VTA0 474 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 FAM199XQ6PEV8 388 aaPredicted RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 PTRH1Q86Y79 214 aaKnown RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 LINC01555Q8NAE3 123 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 FLVCR1-AS1Q8TAF5 88 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 LRFN5Q96NI6 719 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 MENTQ9BUN1 341 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 GPR87Q9BY21 358 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 FAM60AQ9NP50 221 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 IARS2Q9NSE4 1012 aaKnown RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 INTS7Q9NVH2 962 aaKnown RBP21.12■□□□□ 0.97
TRAF4-204ENST00000422344 FBXO5Q9UKT4 447 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 PCDHGA6Q9Y5G7 932 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 COMMD10Q9Y6G5 202 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 NBASA2RRP1 2371 aa21.12■□□□□ 0.97
TRAF4-204ENST00000422344 TTI1O43156 1089 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 OR2B3O76000 313 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 F7P08709 466 aaPredicted RBP21.11■□□□□ 0.97
TRAF4-204ENST00000422344 HBQ1P09105 142 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 OAS2P29728 719 aaKnown RBP21.11■□□□□ 0.97
TRAF4-204ENST00000422344 ERV3-1Q14264 604 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 SF1Q15637 639 aaKnown RBP21.11■□□□□ 0.97
TRAF4-204ENST00000422344 DEFB110Q30KQ9 67 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 DEFB109BQ30KR1 87 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 ACSBG2Q5FVE4 666 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 KCNJ9Q92806 393 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 TRIM51Q9BSJ1 452 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 TWSG1Q9GZX9 223 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 CHRNA10Q9GZZ6 450 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 ADNPQ9H2P0 1102 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 FAM114A2Q9NRY5 505 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 GALPQ9UBC7 116 aa21.11■□□□□ 0.97
TRAF4-204ENST00000422344 MEN1O00255 615 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 BANF1O75531 89 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 CREG1O75629 220 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 MAGP20916 626 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 IVDP26440 423 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 CLCN7P51798 805 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 MPP1Q00013 466 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 GBX1Q14549 363 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 ZIC1Q15915 447 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 KLHL38Q2WGJ6 581 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 ATP1A1-AS1Q5TC04 95 aa21.1■□□□□ 0.97
TRAF4-204ENST00000422344 DSELQ8IZU8 1212 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms