RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PTSQ03393 145 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 LPAL2Q16609 132 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 IL23RQ5VWK5 629 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 HTR3DQ70Z44 454 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 EXOC3L1Q86VI1 746 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 APCDD1Q8J025 514 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 GLB1L3Q8NCI6 653 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PLEKHO2Q8TD55 490 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 DDX1Q92499 740 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TSACCQ96A04 125 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SLC47A1Q96FL8 570 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 HAPLN2Q9GZV7 340 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 LRRC37AA6NMS7 1700 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TMEM265A0A087WTH1 108 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 WWP2O00308 870 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CDC7O00311 574 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 NPHS1O60500 1241 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 DNAJA2O60884 412 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 C6P13671 934 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TCEA1P23193 301 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ACRV1P26436 265 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CD6P30203 668 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ACTR3P61158 418 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CLEC6AQ6EIG7 209 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TAS1R1Q7RTX1 841 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 NUP54Q7Z3B4 507 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CPSF7Q8N684 471 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 RNF148Q8N7C7 305 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PEX13Q92968 403 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TGM7Q96PF1 710 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CNTN6Q9UQ52 1028 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 DUXAA6NLW8 204 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PCDH7O60245 1069 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PRKCHP24723 683 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 MRPL28Q13084 256 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PRKD1Q15139 912 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 C15orf39Q6ZRI6 1047 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF598Q86UK7 904 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 KCT2Q8NC54 265 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 OR10H5Q8NGA6 315 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TMLHEQ9NVH6 421 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 VPS29Q9UBQ0 182 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 MAP1BP46821 2468 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 FAM155AB1AL88 458 aaPredicted RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 HRH2P25021 359 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SLC7A1P30825 629 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CDC42P60953 191 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 THOC6Q86W42 341 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 CLSTN3Q9BQT9 956 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 C1orf109Q9NX04 203 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SLC22A14Q9Y267 594 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 FAM86C2PA6NEL3 165 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SAC3D1A6NKF1 404 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 SCAPQ12770 1279 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 UBAP2LQ14157 1087 aaKnown RBP10.5□□□□□ -0.73
PTCH1-206ENST00000421141 PEBP4Q96S96 227 aa10.5□□□□□ -0.73
PTCH1-206ENST00000421141 TRAPPC6AO75865 159 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ACADSP16219 412 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SLC7A9P82251 487 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 EPS8Q12929 822 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ANGPT1Q15389 498 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 FBXO48Q5FWF7 155 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 Q6ZVL8 140 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 DCBLD1Q8N8Z6 715 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 NAT8LQ8N9F0 302 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SHISA4Q96DD7 197 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 RAPGEFL1Q9UHV5 662 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 TGFB1P01137 390 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 POLR2CP19387 275 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 FAM174AQ8TBP5 190 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 TDRD1Q9BXT4 1180 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 THUMPD1Q9NXG2 353 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 CNOT6Q9ULM6 557 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 VSTM5A8MXK1 200 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 HBQ1P09105 142 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 QPCTQ16769 361 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 PM20D1Q6GTS8 502 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 LRRTM3Q86VH5 581 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 DEPDC4Q8N2C3 294 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 CADM2Q8N3J6 435 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 PLA2G15Q8NCC3 412 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 IFT80Q9P2H3 777 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 TMEM59LQ9UK28 342 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SAMHD1Q9Y3Z3 626 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 MPSTP25325 297 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ITGB7P26010 798 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 CD70P32970 193 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 BDKRB1P46663 353 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 SNTA1Q13424 505 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 FAM78AQ5JUQ0 283 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ARMC3Q5W041 872 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 ARHGAP36Q6ZRI8 547 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 OR2T34Q8NGX1 318 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 PNPT1Q8TCS8 783 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 IMP4Q96G21 291 aaKnown RBP10.49□□□□□ -0.73
PTCH1-206ENST00000421141 PLAGL1Q9UM63 463 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 OR6C74A6NCV1 312 aa10.49□□□□□ -0.73
PTCH1-206ENST00000421141 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms