RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GALPQ9UBC7 116 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 DHCR7Q9UBM7 475 aaKnown RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 TSR3Q9UJK0 312 aaKnown RBP14.55□□□□□ -0.08
UBXN4-203ENST00000416538 SOX13Q9UN79 622 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 SNX7Q9UNH6 387 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 BOLA1Q9Y3E2 137 aa14.55□□□□□ -0.08
UBXN4-203ENST00000416538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.54□□□□□ -0.08
UBXN4-203ENST00000416538 ISM1B1AKI9 464 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 PRICKLE3O43900 615 aaPredicted RBP14.54□□□□□ -0.08
UBXN4-203ENST00000416538 KLF7O75840 302 aaPredicted RBP14.54□□□□□ -0.08
UBXN4-203ENST00000416538 OR2B3O76000 313 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 VAPBO95292 243 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 APOA4P06727 396 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 PSMB5P28074 263 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 FOXK1P85037 733 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 PLOD1Q02809 727 aaPredicted RBP14.54□□□□□ -0.08
UBXN4-203ENST00000416538 GBX1Q14549 363 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 SLC9A5Q14940 896 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 KIR2DS3Q14952 304 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 C1orf189Q5VU69 101 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 UNC5DQ6UXZ4 953 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 ASB18Q6ZVZ8 466 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 RASGEF1CQ8N431 466 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 ZNF655Q8N720 491 aaPredicted RBP14.54□□□□□ -0.08
UBXN4-203ENST00000416538 ASZ1Q8WWH4 475 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 THAP4Q8WY91 577 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 FAM136AQ96C01 138 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 TCTN2Q96GX1 697 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 MLXIPLQ9NP71 852 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 SLC22A11Q9NSA0 550 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 BFARQ9NZS9 450 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 SERTAD3Q9UJW9 196 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 PLAAQ9Y263 795 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 NEU2Q9Y3R4 380 aa14.54□□□□□ -0.08
UBXN4-203ENST00000416538 ZSCAN9O15535 394 aaPredicted RBP14.53□□□□□ -0.08
UBXN4-203ENST00000416538 CD9P21926 228 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 NPY2RP49146 381 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 YBX1P67809 324 aaKnown RBP14.53□□□□□ -0.08
UBXN4-203ENST00000416538 KLRB1Q12918 225 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 GPS1Q13098 491 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 ATP1A4Q13733 1029 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 FCRL6Q6DN72 434 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 PTRHD1Q6GMV3 140 aaKnown RBP14.53□□□□□ -0.08
UBXN4-203ENST00000416538 KIAA0930Q6ICG6 404 aaPredicted RBP14.53□□□□□ -0.08
UBXN4-203ENST00000416538 RHBDD2Q6NTF9 364 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 CENPUQ71F23 418 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 DTWD1Q8N5C7 304 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 OR2L8Q8NGY9 312 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 MAIP1Q8WWC4 291 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 TTC1Q99614 292 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 ING2Q9H160 280 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 GNPTGQ9UJJ9 305 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 ANAPC5Q9UJX4 755 aa14.53□□□□□ -0.08
UBXN4-203ENST00000416538 RP1L1Q8IWN7 2480 aaPredicted RBP14.52□□□□□ -0.08
UBXN4-203ENST00000416538 HIVEP3Q5T1R4 2406 aa14.52□□□□□ -0.08
UBXN4-203ENST00000416538 A0A1W2PPV9 198 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MASP2O00187 686 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 RASGRF2O14827 1237 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 CEACAM4O75871 244 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 C1orf105O95561 183 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 KRT14P02533 472 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MCM3P25205 808 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MLLT10P55197 1068 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 CDK16Q00536 496 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 SRSF1Q07955 248 aaKnown RBP eCLIP14.52□□□□□ -0.099e-7■□□□□ 11.1
UBXN4-203ENST00000416538 TMED2Q15363 201 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.52□□□□□ -0.09
UBXN4-203ENST00000416538 CNSTQ6PJW8 725 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 C4orf22Q6V702 233 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MRGPREQ86SM8 312 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 HOOK3Q86VS8 718 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 GPR135Q8IZ08 494 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 OTUD6BQ8N6M0 293 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 GIMAP7Q8NHV1 300 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 COG1Q8WTW3 980 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 SEC14L1Q92503 715 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MIB2Q96AX9 1013 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 SLC30A3Q99726 388 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 TSSK1BQ9BXA7 367 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 SYNPO2LQ9H987 977 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 EURLQ9NYK6 297 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 MED16Q9Y2X0 877 aa14.52□□□□□ -0.09
UBXN4-203ENST00000416538 SPTAN1Q13813 2472 aaKnown RBP14.52□□□□□ -0.09
UBXN4-203ENST00000416538 CTSVO60911 334 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 NDUFS3O75489 264 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 MED26O95402 600 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 FMO4P31512 558 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 GRIA3P42263 894 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 MAGEA3P43357 314 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 CCL11P51671 97 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 FASTKQ14296 549 aaKnown RBP14.51□□□□□ -0.09
UBXN4-203ENST00000416538 CYP1B1Q16678 543 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 NADK2Q4G0N4 442 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 PAPD7Q5XG87 772 aaKnown RBP14.51□□□□□ -0.09
UBXN4-203ENST00000416538 LRRC6Q86X45 466 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 REXO1L1PQ8IX06 675 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 FDCSPQ8NFU4 85 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 PANX3Q96QZ0 392 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 SLC25A23Q9BV35 468 aa14.51□□□□□ -0.09
UBXN4-203ENST00000416538 NUDT9Q9BW91 350 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms