RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CEACAM4O75871 244 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 FKBP9O95302 570 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 MGAT1P26572 445 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 GRB7Q14451 532 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 SSPNQ14714 243 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 FAM69BQ5VUD6 431 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 ARMC3Q5W041 872 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 MRNIPQ6NTE8 343 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 OTOAQ7RTW8 1153 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 OTUD6BQ8N6M0 293 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 ZNF655Q8N720 491 aaPredicted RBP16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 LINC01555Q8NAE3 123 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 DENND1AQ8TEH3 1009 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 MIB2Q96AX9 1013 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 RAD51AP1Q96B01 352 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 NDC1Q9BTX1 674 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 SYBUQ9NX95 663 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 EURLQ9NYK6 297 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 SOX13Q9UN79 622 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 ANKRD12Q6UB98 2062 aa16.93■□□□□ 0.3
PDLIM2-208ENST00000416159 SETXQ7Z333 2677 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 KLF7O75840 302 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 VAPBO95292 243 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 MAGP20916 626 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 CXCR5P32302 372 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 CD97P48960 835 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 MLLT10P55197 1068 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 EIF3BP55884 814 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 C1orf189Q5VU69 101 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 ATCAYQ86WG3 371 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 HPS6Q86YV9 775 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 MCATQ8IVS2 390 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 FAM20CQ8IXL6 584 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 RAB42Q8N4Z0 105 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 C2orf73Q8N5S3 287 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 PRELID2Q8N945 189 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 DLG3Q92796 817 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 MFSD3Q96ES6 412 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 FOPNLQ96NB1 174 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 IL17FQ96PD4 163 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 TCF12Q99081 682 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 IFT80Q9P2H3 777 aaPredicted RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 DHCR7Q9UBM7 475 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 NDOR1Q9UHB4 597 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 PLAAQ9Y263 795 aa16.92■□□□□ 0.3
PDLIM2-208ENST00000416159 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 TCRBV7S3A2A0A539 114 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 H3BMM5 538 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ZNF185O15231 689 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 IGHEP01854 428 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 CTSBP07858 339 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ARNTP27540 789 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 CCNFP41002 786 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 FOLR3P41439 243 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ARSFP54793 590 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 CCZ1BP86790 482 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 CCZ1P86791 482 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ATP1A4Q13733 1029 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 SF1Q15637 639 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ZC3H12BQ5HYM0 836 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 RNF187Q5TA31 235 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 FIGLAQ6QHK4 219 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 TAX1BP1Q86VP1 789 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 MAGEC3Q8TD91 643 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 SKA2Q8WVK7 121 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 ZUFSPQ96AP4 578 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 CIDEBQ9UHD4 219 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 TTC7AQ9ULT0 858 aaPredicted RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 KLHL20Q9Y2M5 609 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 PPP2R2CQ9Y2T4 447 aa16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 PTRH2Q9Y3E5 179 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-208ENST00000416159 TTLL8A6PVC2 850 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 TARM1B6A8C7 271 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 DPM1O60762 260 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 C1orf105O95561 183 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 PAMP19021 973 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 FMO4P31512 558 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 OTX2P32243 289 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 MAGEA6P43360 314 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 ADARP55265 1226 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 UBAP2LQ14157 1087 aaKnown RBP16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 KCNJ11Q14654 390 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 TRIP13Q15645 432 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 TYSND1Q2T9J0 566 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 NKAIN1Q4KMZ8 207 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 CTSL3PQ5NE16 218 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 KIAA0930Q6ICG6 404 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 CES3Q6UWW8 571 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 LMNTD1Q8N9Z9 388 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 FDCSPQ8NFU4 85 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 PTERQ96BW5 349 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 FER1L6-AS2Q96M78 137 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 BIRC8Q96P09 236 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 NFS1Q9Y697 457 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 DOPEY2Q9Y3R5 2298 aa16.9■□□□□ 0.3
PDLIM2-208ENST00000416159 MAGEB16A2A368 324 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 PEX12O00623 359 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 KRT14P02533 472 aa16.89■□□□□ 0.29
PDLIM2-208ENST00000416159 ESR1P03372 595 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms