RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 AKAP3O75969 853 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 RLN1P04808 185 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 FAM86B2P0C5J1 330 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 FCGR1AP12314 374 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 EPORP19235 508 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 GABRA5P31644 462 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 CTNNB1P35222 781 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 PEX5P50542 639 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 ISL1P61371 349 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 TROAPQ12815 778 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 FAM109BQ6ICB4 259 aaPredicted RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 FIGLAQ6QHK4 219 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 NHLRC1Q6VVB1 395 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 RAD9BQ6WBX8 426 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 MEX3BQ6ZN04 569 aaKnown RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 SATL1Q86VE3 508 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 TMPRSS12Q86WS5 348 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 TMEM219Q86XT9 240 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 C1orf52Q8N6N3 182 aaKnown RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 SLC4A11Q8NBS3 891 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 GMCL1P1Q8NEA9 526 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 NEK11Q8NG66 645 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 CCDC110Q8TBZ0 833 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 PRMT6Q96LA8 375 aaPredicted RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 ZNF582Q96NG8 517 aaPredicted RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 OR6C1Q96RD1 312 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 NTPCRQ9BSD7 190 aaKnown RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 GAREM1Q9H706 876 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 PRMT8Q9NR22 394 aaPredicted RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 ZNF624Q9P2J8 865 aaPredicted RBP4.91□□□□□ -1.62
LSM5-206ENST00000409987 FBXW2Q9UKT8 454 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 OR2W1Q9Y3N9 320 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 PCDHAC2Q9Y5I4 1007 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 HMGXB3Q12766 1538 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 ACEP12821 1306 aa4.91□□□□□ -1.62
LSM5-206ENST00000409987 A0A1W2PPM1 405 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 FEZF1A0PJY2 475 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 OR5K3A6NET4 321 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 C5orf52A6NGY3 159 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 SSX4O60224 188 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 LDB3O75112 727 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 BMP15O95972 392 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 GHRP10912 638 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 ITGA2P17301 1181 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 ARF4P18085 180 aaPredicted RBP4.9□□□□□ -1.63
LSM5-206ENST00000409987 EEF1B2P24534 225 aaKnown RBP4.9□□□□□ -1.63
LSM5-206ENST00000409987 CD27P26842 260 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 ARFIP1P53367 373 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 HNRNPKP61978 463 aaKnown RBP eCLIP4.9□□□□□ -1.63
LSM5-206ENST00000409987 TUBA1BP68363 451 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 CDK3Q00526 305 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 SGCBQ16585 318 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 ZCCHC12Q6PEW1 402 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 DET1Q7L5Y6 550 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 IQCF1Q8N6M8 205 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 UXS1Q8NBZ7 420 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 URGCPQ8TCY9 931 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 SCARB1Q8WTV0 552 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 NEUROG1Q92886 237 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 NXNL1Q96CM4 212 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 CDCA5Q96FF9 252 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 C5orf30Q96GV9 206 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 ZNF479Q96JC4 524 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 MS4A10Q96PG2 267 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 KCNK16Q96T55 309 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 KATNB1Q9BVA0 655 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 CSTL1Q9H114 145 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 DPH5Q9H2P9 285 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 SLA2Q9H6Q3 261 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 EQTNQ9NQ60 294 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 PRMT7Q9NVM4 692 aaPredicted RBP4.9□□□□□ -1.63
LSM5-206ENST00000409987 RHCGQ9UBD6 479 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 WNT16Q9UBV4 365 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 TDRKHQ9Y2W6 561 aaKnown RBP4.9□□□□□ -1.63
LSM5-206ENST00000409987 TEX264Q9Y6I9 313 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 CLCA3PQ9Y6N3 262 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 CKAP5Q14008 2032 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 PCSK5Q92824 1860 aa4.9□□□□□ -1.63
LSM5-206ENST00000409987 KIF21AQ7Z4S6 1674 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 PROB1E7EW31 1015 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 MCF2LO15068 1137 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ST8SIA3O43173 380 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 PALMO75781 387 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 SNX4O95219 450 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 MOCS3O95396 460 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 SLC16A8O95907 504 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 HLA-DOBP13765 273 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 GNAZP19086 355 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 POLR2CP19387 275 aaPredicted RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 ADSSP30520 456 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 HTR6P50406 440 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 SEC61A1P61619 476 aaKnown RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 RELQ04864 619 aaPredicted RBP4.89□□□□□ -1.63
LSM5-206ENST00000409987 LTBQ06643 244 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 HSPB3Q12988 150 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 ZNF234Q14588 700 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 UGCGQ16739 394 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 CDO1Q16878 200 aa4.89□□□□□ -1.63
LSM5-206ENST00000409987 TRNP1Q6NT89 227 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms