RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 PPANQ9NQ55 473 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 LHX9Q9NQ69 397 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 MED16Q9Y2X0 877 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SMG1Q96Q15 3661 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ATRXP46100 2492 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 CPNE3O75131 537 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 TCN2P20062 427 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 CYP2A7P20853 494 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 CARSP49589 748 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 GPS2Q13227 327 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 GBX1Q14549 363 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 HIF1AQ16665 826 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SPANXN3Q5MJ09 141 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 LMNTD2Q8IXW0 634 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 SPATA4Q8NEY3 305 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 OR2L8Q8NGY9 312 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 OR8K5Q8NH50 307 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 N4BP2L2Q92802 583 aaPredicted RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 RAD51AP1Q96B01 352 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 CLIP3Q96DZ5 547 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 GPR21Q99679 349 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ARHGAP9Q9BRR9 750 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 EFHD1Q9BUP0 239 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 DPH5Q9H2P9 285 aa17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ZC3H7BQ9UGR2 993 aaKnown RBP17.53■□□□□ 0.4
PTPRN2-204ENST00000404321 ARHGEF33A8MVX0 844 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 TP73O15350 636 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 TTC4O95801 387 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 MT-ND3P03897 115 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 CTSBP07858 339 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 FAM87AP0C7U9 286 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 MAGP20916 626 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 PSMB5P28074 263 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 ATP5DP30049 168 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 ARL4CP56559 192 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 DNASE1L3Q13609 305 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 SLC5A12Q1EHB4 618 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 C2CD4AQ8NCU7 369 aaPredicted RBP17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 DENND1AQ8TEH3 1009 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 KCNJ9Q92806 393 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 MR1Q95460 341 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 TCTN2Q96GX1 697 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 NAT9Q9BTE0 207 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 TWSG1Q9GZX9 223 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 SERTAD3Q9UJW9 196 aa17.52■□□□□ 0.39
PTPRN2-204ENST00000404321 TERTO14746 1132 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 C1QL1O75973 258 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 MATN4O95460 622 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 ITGB2P05107 769 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 GABRB3P28472 473 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 OAS2P29728 719 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 CCNFP41002 786 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 ITGA1P56199 1179 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 CDC20Q12834 499 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 PDIA2Q13087 525 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 ERV3-1Q14264 604 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 FASTKD3Q14CZ7 662 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 SF1Q15637 639 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 TTLL9Q3SXZ7 439 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 LCN10Q6JVE6 187 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 TRMT10BQ6PF06 316 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 CPNE9Q8IYJ1 553 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 EXD3Q8N9H8 876 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 CD200R1Q8TD46 325 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 CERS2Q96G23 380 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 AARSD1Q9BTE6 412 aaKnown RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 RAB11FIP5Q9BXF6 653 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 SLC7A5P2Q9GIP4 190 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 SPRTNQ9H040 489 aaPredicted RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 ACTR5Q9H9F9 607 aaPredicted RBP17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 LATS2Q9NRM7 1088 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 IRAK4Q9NWZ3 460 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 MRFAP1Q9Y605 127 aa17.51■□□□□ 0.39
PTPRN2-204ENST00000404321 ATMQ13315 3056 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 E7EQ34 232 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 RAD51CO43502 376 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 MCM3P25205 808 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 GRIA3P42263 894 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 RPS18P62269 152 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 TSTA3Q13630 321 aaPredicted RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 FASTKQ14296 549 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 DEFB109BQ30KR1 87 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 PTCHD3Q3KNS1 767 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 RBM20Q5T481 1227 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 PIWIL4Q7Z3Z4 852 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 RAB42Q8N4Z0 105 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 LSM14AQ8ND56 463 aaKnown RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 MAGEC3Q8TD91 643 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 INPP5DQ92835 1189 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 C16orf45Q96MC5 204 aaPredicted RBP17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 MIPEPQ99797 713 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 CHST8Q9H2A9 424 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 SYTL2Q9HCH5 934 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 PCDHB3Q9Y5E6 796 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 TEX264Q9Y6I9 313 aa17.5■□□□□ 0.39
PTPRN2-204ENST00000404321 TK2O00142 265 aa17.49■□□□□ 0.39
PTPRN2-204ENST00000404321 SMAPO00193 183 aa17.49■□□□□ 0.39
PTPRN2-204ENST00000404321 MEN1O00255 615 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms