RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 MMP10P09238 476 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TGFB3P10600 412 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 RPS3P23396 243 aaKnown RBP eCLIP8.23□□□□□ -1.095e-7■□□□□ 10.4
CHD8-201ENST00000399982 CD79BP40259 229 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SIM2Q14190 667 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 FBXO47Q5MNV8 452 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 UBAP2Q5T6F2 1119 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 FAM46CQ5VWP2 391 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 GK5Q6ZS86 529 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 BPIFB1Q8TDL5 484 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 AGAP2Q99490 1192 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 PBDC1Q9BVG4 233 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TMED9Q9BVK6 235 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ELOVL4Q9GZR5 314 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 LRTM1Q9HBL6 345 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 ZFP57Q9NU63 452 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 A0A1W2PPM1 405 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 VILLO15195 856 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 COQ9O75208 318 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CLEC3AO75596 197 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 TACSTD2P09758 323 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 MAGEA3P43357 314 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CSTF1Q05048 431 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 C9orf64Q5T6V5 341 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 LAS2Q8IYD9 372 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 GPR65Q8IYL9 337 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 C12orf45Q8N5I9 185 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 LNX1Q8TBB1 728 aaPredicted RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 CLP1Q92989 425 aaKnown RBP8.23□□□□□ -1.09
CHD8-201ENST00000399982 LMLNQ96KR4 655 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 SNCAIPQ9Y6H5 919 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 U3KQV3 271 aa8.23□□□□□ -1.09
CHD8-201ENST00000399982 CEP152O94986 1710 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 H3BSH0 61 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TPST2O60704 377 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 DNAJB6O75190 326 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CSTBP04080 98 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 SUPT20HL2P0C7V6 817 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CYP3A5P20815 502 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HNF1BP35680 557 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 RFX5P48382 616 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 NR0B1P51843 470 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 SLC26A5P58743 744 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 BAATQ14032 418 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 GK3PQ14409 553 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CERS6Q6ZMG9 384 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 VTCN1Q7Z7D3 282 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HID1Q8IV36 788 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZDHHC21Q8IVQ6 265 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ARHGAP12Q8IWW6 846 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 GAL3ST4Q96RP7 486 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TM9SF2Q99805 663 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PLEKHA3Q9HB20 300 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 FARSBQ9NSD9 589 aaKnown RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 KDM6BO15054 1643 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MYO3AQ8NEV4 1616 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CXCR6O00574 342 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MICAL2O94851 1124 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 LATS1O95835 1130 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 IL1AP01583 271 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 IL3P08700 152 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MAP3K8P41279 467 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SLC3A1Q07837 685 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PEX6Q13608 980 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MINDY4Q4G0A6 757 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 MEDAGQ5VYS4 303 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 OGFOD2Q6N063 350 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 GDPGP1Q6ZNW5 385 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 LIX1Q8N485 282 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 RIT1Q92963 219 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 OR5B12Q96R08 314 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SLAIN2Q9P270 581 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 A0A087X0B3 334 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 C12orf71A8MTZ7 269 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ITGA5P08648 1049 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PSMB4P28070 264 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CD86P42081 329 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HLCSP50747 726 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TKTL1P51854 596 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SCARF1Q14162 830 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HACD4Q5VWC8 232 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PNCKQ6P2M8 343 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ATAD1Q8NBU5 361 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 CPT1BQ92523 772 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 NCSTNQ92542 709 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PPCDCQ96CD2 204 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TIFAQ96CG3 184 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 ZSWIM3Q96MP5 696 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 TMEM27Q9HBJ8 222 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 FZD3Q9NPG1 666 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 PRMT8Q9NR22 394 aaPredicted RBP8.22□□□□□ -1.09
CHD8-201ENST00000399982 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHD8-201ENST00000399982 MALT1Q9UDY8 824 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 SCP2D1Q9UJQ7 156 aa8.22□□□□□ -1.09
CHD8-201ENST00000399982 HECW2Q9P2P5 1572 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms