RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 CYBBP04839 570 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PKMP14618 531 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 HOXB9P17482 250 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 MAGP20916 626 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CXCR2P25025 360 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TNFRSF4P43489 277 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CHRNA4P43681 627 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TPTEP56180 551 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MPP1Q00013 466 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ART3Q13508 389 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MAPK11Q15759 364 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 RAB30Q15771 203 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ATP6AP1Q15904 470 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 UNC50Q53HI1 259 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TMTC4Q5T4D3 741 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ATAD3BQ5T9A4 648 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ARMC12Q5T9G4 340 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZNF470Q6ECI4 717 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SIGIRRQ6IA17 410 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PSAPL1Q6NUJ1 521 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZNF773Q6PK81 442 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SPRED1Q7Z699 444 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TFAP2DQ7Z6R9 452 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 DSG4Q86SJ6 1040 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 RBFAQ8N0V3 343 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 DPP10Q8N608 796 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SNX31Q8N9S9 440 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PSD4Q8NDX1 1056 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ACVR1CQ8NER5 493 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 OR7D4Q8NG98 312 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 IPCEF1Q8WWN9 437 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 S100ZQ8WXG8 99 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SNX19Q92543 992 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 FUBP1Q96AE4 644 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 NACC2Q96BF6 587 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SLC22A12Q96S37 553 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SLC39A3Q9BRY0 314 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PCDHAC1Q9H158 963 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 S1PR5Q9H228 398 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 RAD21L1Q9H4I0 556 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SEPT10Q9P0V9 454 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MARCH4Q9P2E8 410 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 TRPS1Q9UHF7 1281 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PCDHGA11Q9Y5H2 935 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CACNA1IQ9P0X4 2223 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZSCAN5BA6NJL1 495 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 A8MX80 341 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 E7ENX8 843 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 NRG2O14511 850 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 SDHDO14521 159 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ACOX3O15254 700 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SGTAO43765 313 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 HSPA4LO95757 839 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 IGLV3-19P01714 112 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 NTRK1P04629 796 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TCN1P20061 433 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 ITGB7P26010 798 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SERPINA4P29622 427 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 VIPR1P32241 457 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 GSTM5P46439 218 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CLK3P49761 638 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 HNMTP50135 292 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PNLIPRP1P54315 467 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PSME3P61289 254 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 NFATC2Q13469 925 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 SQLEQ14534 574 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 FAM214AQ32MH5 1076 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PGS1Q32NB8 556 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TMEM95Q3KNT9 176 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 LRIT3Q3SXY7 679 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TJAP1Q5JTD0 557 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CNSTQ6PJW8 725 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 DCP2Q8IU60 420 aaKnown RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 BBS7Q8IWZ6 715 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MFSD4AQ8N468 514 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 CPA6Q8N4T0 437 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TEX19Q8NA77 164 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 WFDC5Q8TCV5 224 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 HDAC10Q969S8 669 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZUFSPQ96AP4 578 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TBC1D20Q96BZ9 403 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 C11orf24Q96F05 449 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 NPAS2Q99743 824 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 COQ7Q99807 217 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 TCF25Q9BQ70 676 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 EFHD1Q9BUP0 239 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 WDR55Q9H6Y2 383 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 CPNE5Q9HCH3 593 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 AGPAT4Q9NRZ5 378 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ZDHHC3Q9NYG2 299 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 GPRC5BQ9NZH0 403 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 KLQ9UEF7 1012 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 ERVW-1Q9UQF0 538 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 PRKAB1Q9Y478 270 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 MAGED1Q9Y5V3 778 aaPredicted RBP5.24□□□□□ -1.57
VPS41-203ENST00000395969 HTTP42858 3142 aa5.24□□□□□ -1.57
VPS41-203ENST00000395969 KCNE1BA0A087WTH5 132 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 PRORSD1PA6NEY8 169 aa5.23□□□□□ -1.57
VPS41-203ENST00000395969 TTC34A8MYJ7 566 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms