RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DNAJB5O75953 348 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CTPS1P17812 591 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ATF6P18850 670 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 RYKP34925 604 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 PHC1P78364 1004 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CDK5R2Q13319 367 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF846Q147U1 533 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CACHD1Q5VU97 1274 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ATG9BQ674R7 924 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 RNF165Q6ZSG1 346 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 TRIM46Q7Z4K8 759 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 RGL4Q8IZJ4 473 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ARL10Q8N8L6 244 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 FAR1Q8WVX9 515 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 EGFL8Q99944 293 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CD244Q9BZW8 370 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 VNN3Q9NY84 501 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 OPTCQ9UBM4 332 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 PRSS21Q9Y6M0 314 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 PTPRSQ13332 1948 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF106Q9H2Y7 1883 aaKnown RBP17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 TMEM221A6NGB7 291 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 BCKDKO14874 412 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ADAM23O75077 832 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 UGT2B4P06133 528 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 GALTP07902 379 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CCDC159P0C7I6 412 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 EMX1Q04741 257 aaPredicted RBP17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 VAC14Q08AM6 782 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 TWF1Q12792 350 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 RAPSNQ13702 412 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 USP39Q53GS9 565 aaKnown RBP17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 SERPINA9Q86WD7 417 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 OR10Q1Q8NGQ4 319 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF566Q969W8 418 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ITCHQ96J02 903 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ALPK1Q96QP1 1244 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 GPR63Q9BZJ6 419 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 CLPBQ9H078 707 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 ASIC5Q9NY37 505 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 WWOXQ9NZC7 414 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 LHX3Q9UBR4 397 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 PCDHB9Q9Y5E1 797 aa17.92■□□□□ 0.46
PCDHA1-202ENST00000394633 LOC730098B7Z3J9 87 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 MANBAO00462 879 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 GAPDHSO14556 408 aaPredicted RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 MAN1A2O60476 641 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 MITFO75030 526 aaPredicted RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 ULK1O75385 1050 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 FSHRP23945 695 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 CXorf57Q6NSI4 855 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 FAM151BQ6UXP7 276 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 DET1Q7L5Y6 550 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 UBE2Q1Q7Z7E8 422 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 RNF168Q8IYW5 571 aaPredicted RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 NACA2Q9H009 215 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 TNKS2Q9H2K2 1166 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 TRIT1Q9H3H1 467 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 AKIP1Q9NQ31 210 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 C1orf109Q9NX04 203 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 AP3M1Q9Y2T2 418 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 CPQQ9Y646 472 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 CHD9Q3L8U1 2897 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 GOLGA8CPA6NN73 597 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 HOXA2O43364 376 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 FZD6O60353 706 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 WDR47O94967 919 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 ALDH2P05091 517 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 ALPIP09923 528 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 ITGAMP11215 1152 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 RGS4P49798 205 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 IL5RAQ01344 420 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 OCA2Q04671 838 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 IL18R1Q13478 541 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 ZC3H12BQ5HYM0 836 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 CERS6Q6ZMG9 384 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 TAS1R1Q7RTX1 841 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 HIPK1Q86Z02 1210 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 FAM120BQ96EK7 910 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 SERHLQ9NQF3 203 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 TRPS1Q9UHF7 1281 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 PAIP2BQ9ULR5 123 aaKnown RBP17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 PCDHGB1Q9Y5G3 927 aa17.91■□□□□ 0.46
PCDHA1-202ENST00000394633 A0A1B0GVM2 712 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 TOR1BO14657 336 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 GABARAPO95166 117 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC25A14O95258 325 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 FTH1P02794 183 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 BCKDHAP12694 445 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 ZNF7P17097 686 aaPredicted RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 IL1RNP18510 177 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 RPS3P23396 243 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 CORO1AP31146 461 aaKnown RBP17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 HMGCLP35914 325 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 TRIM16LQ309B1 348 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 RFX4Q33E94 735 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 RTP2Q5QGT7 225 aa17.9■□□□□ 0.46
PCDHA1-202ENST00000394633 CES5AQ6NT32 575 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms