RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PDIK1LQ8N165 341 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 RAB42Q8N4Z0 105 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 SLC38A9Q8NBW4 561 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 CLIP3Q96DZ5 547 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 SNF8Q96H20 258 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 RAB11FIP5Q9BXF6 653 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 KCND3Q9UK17 655 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 PCDHB3Q9Y5E6 796 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 BAHCC1Q9P281 2608 aa29.66■■■□□ 2.34
CMTM4-202ENST00000394106 SNRNP200O75643 2136 aaKnown RBP29.65■■■□□ 2.34
CMTM4-202ENST00000394106 TERTO14746 1132 aaKnown RBP29.65■■■□□ 2.34
CMTM4-202ENST00000394106 HAUS5O94927 633 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 FAM87AP0C7U9 286 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 CASQ1P31415 396 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 ITGA1P56199 1179 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 GPS2Q13227 327 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 KLHL38Q2WGJ6 581 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 SPANXN3Q5MJ09 141 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 ATP1A1-AS1Q5TC04 95 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 HIBCHQ6NVY1 386 aaPredicted RBP29.65■■■□□ 2.34
CMTM4-202ENST00000394106 EXD3Q8N9H8 876 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 MAGEC3Q8TD91 643 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 MR1Q95460 341 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 SLC22A18Q96BI1 424 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 CFAP36Q96G28 342 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 SLC30A3Q99726 388 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 NAT9Q9BTE0 207 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 CAMSAP3Q9P1Y5 1249 aaPredicted RBP29.65■■■□□ 2.34
CMTM4-202ENST00000394106 KLHL20Q9Y2M5 609 aa29.65■■■□□ 2.34
CMTM4-202ENST00000394106 MATN4O95460 622 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 OAS2P29728 719 aaKnown RBP29.64■■■□□ 2.34
CMTM4-202ENST00000394106 TTLL9Q3SXZ7 439 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 BORAQ6PGQ7 559 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 SPNS2Q8IVW8 549 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 MED8Q96G25 268 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 CATSPER2Q96P56 530 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 SLC7A5P2Q9GIP4 190 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 ACTR5Q9H9F9 607 aaPredicted RBP29.64■■■□□ 2.34
CMTM4-202ENST00000394106 CHMP2BQ9UQN3 213 aa29.64■■■□□ 2.34
CMTM4-202ENST00000394106 SPTBP11277 2137 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 EFCAB8A8MWE9 144 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 C21orf140B9A014 251 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 E7EQ34 232 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 SMAPO00193 183 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 SEC31AO94979 1220 aaKnown RBP29.63■■■□□ 2.33
CMTM4-202ENST00000394106 MAGP20916 626 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 ELK3P41970 407 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 MRPS25P82663 173 aaKnown RBP29.63■■■□□ 2.33
CMTM4-202ENST00000394106 C19orf57Q0VDD7 668 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 CUL1Q13616 776 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 GPR135Q8IZ08 494 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 ZNF843Q8N446 348 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 GIMAP7Q8NHV1 300 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 GABPB2Q8TAK5 448 aaPredicted RBP29.63■■■□□ 2.33
CMTM4-202ENST00000394106 KCNJ9Q92806 393 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 RUFY1Q96T51 708 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 MED16Q9Y2X0 877 aa29.63■■■□□ 2.33
CMTM4-202ENST00000394106 ATRXP46100 2492 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 HCRTR1O43613 425 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 KLK3P07288 261 aaPredicted RBP29.62■■■□□ 2.33
CMTM4-202ENST00000394106 ERV3-1Q14264 604 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 SF1Q15637 639 aaKnown RBP29.62■■■□□ 2.33
CMTM4-202ENST00000394106 HIF1AQ16665 826 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 SYT10Q6XYQ8 523 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 C2CD4AQ8NCU7 369 aaPredicted RBP29.62■■■□□ 2.33
CMTM4-202ENST00000394106 GPR21Q99679 349 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 PPANQ9NQ55 473 aaKnown RBP29.62■■■□□ 2.33
CMTM4-202ENST00000394106 ZC3H7BQ9UGR2 993 aaKnown RBP29.62■■■□□ 2.33
CMTM4-202ENST00000394106 PCDHGA6Q9Y5G7 932 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 COMMD10Q9Y6G5 202 aa29.62■■■□□ 2.33
CMTM4-202ENST00000394106 MEN1O00255 615 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 ZNF749O43361 778 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 OR2B3O76000 313 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 ARL4CP56559 192 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 ETF1P62495 437 aaKnown RBP29.61■■■□□ 2.33
CMTM4-202ENST00000394106 DEFB109BQ30KR1 87 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 DENND1AQ8TEH3 1009 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 CERS2Q96G23 380 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 LRFN5Q96NI6 719 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 AARSD1Q9BTE6 412 aaKnown RBP29.61■■■□□ 2.33
CMTM4-202ENST00000394106 CHRNA10Q9GZZ6 450 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 SPRTNQ9H040 489 aaPredicted RBP29.61■■■□□ 2.33
CMTM4-202ENST00000394106 CHST8Q9H2A9 424 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 ACTL8Q9H568 366 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 IRAK4Q9NWZ3 460 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 SNX24Q9Y343 169 aa29.61■■■□□ 2.33
CMTM4-202ENST00000394106 ARHGEF33A8MVX0 844 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 VPS26AO75436 327 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 GABRA4P48169 554 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 CARSP49589 748 aaKnown RBP29.6■■■□□ 2.33
CMTM4-202ENST00000394106 RPS15P62841 145 aaKnown RBP29.6■■■□□ 2.33
CMTM4-202ENST00000394106 COL9A2Q14055 689 aaPredicted RBP29.6■■■□□ 2.33
CMTM4-202ENST00000394106 EEF1AKMT2Q5JPI9 291 aaKnown RBP29.6■■■□□ 2.33
CMTM4-202ENST00000394106 DSELQ8IZU8 1212 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 DNAJC22Q8N4W6 341 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 INPP5DQ92835 1189 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 NDNQ99608 321 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 FAM114A2Q9NRY5 505 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 PCMTD2Q9NV79 361 aa29.6■■■□□ 2.33
CMTM4-202ENST00000394106 INTS7Q9NVH2 962 aaKnown RBP29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms