RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 KLHL25Q9H0H3 589 aa13.1□□□□□ -0.31
TRBV4-1-201ENST00000390357 EURLQ9NYK6 297 aa13.1□□□□□ -0.31
TRBV4-1-201ENST00000390357 IFT80Q9P2H3 777 aaPredicted RBP13.1□□□□□ -0.31
TRBV4-1-201ENST00000390357 MYO18BQ8IUG5 2567 aa13.1□□□□□ -0.31
TRBV4-1-201ENST00000390357 IQCF5A8MTL0 148 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 PEX12O00623 359 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 KLF7O75840 302 aaPredicted RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 ESR1P03372 595 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 MLNP12872 115 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 ATP5DP30049 168 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 PTGIRP43119 386 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 UBAP2LQ14157 1087 aaKnown RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 SF1Q15637 639 aaKnown RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 FAM198BQ6UWH4 519 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 NAPRTQ6XQN6 538 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 MCATQ8IVS2 390 aaKnown RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 ZBTB2Q8N680 514 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 CFAP61Q8NHU2 1237 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 MIB2Q96AX9 1013 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 PBKQ96KB5 322 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 GBP5Q96PP8 586 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 MENTQ9BUN1 341 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 SPRTNQ9H040 489 aaPredicted RBP13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 IRAK4Q9NWZ3 460 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 JRKLQ9Y4A0 524 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 ANKRD12Q6UB98 2062 aa13.09□□□□□ -0.31
TRBV4-1-201ENST00000390357 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 TTLL8A6PVC2 850 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 K7EM74 188 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 VPS4BO75351 444 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 IPO13O94829 963 aaKnown RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 VAPBO95292 243 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 C1orf105O95561 183 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 OGNP20774 298 aaKnown RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 NMBRP28336 390 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 HSD17B2P37059 387 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 FOLR3P41439 243 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 MAGEA6P43360 314 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 KCNJ1P48048 391 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 SOX8P57073 446 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 GRM7Q14831 915 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 ZIC1Q15915 447 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 IGFBP7Q16270 282 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 TYSND1Q2T9J0 566 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 NKAIN1Q4KMZ8 207 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 COLEC12Q5KU26 742 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 MRPL14Q6P1L8 145 aaKnown RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 VRK3Q8IV63 474 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 ZNF655Q8N720 491 aaPredicted RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 EFCAB3Q8N7B9 438 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 LMNTD1Q8N9Z9 388 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 LINC01555Q8NAE3 123 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 OR2Y1Q8NGV0 311 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 NRTNQ99748 197 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 INTS10Q9NVR2 710 aaKnown RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 SPATA7Q9P0W8 599 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 KLHL42Q9P2K6 505 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 TTC7AQ9ULT0 858 aaPredicted RBP13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 KLK4Q9Y5K2 254 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 MED13Q9UHV7 2174 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 CCDC88CQ9P219 2028 aa13.08□□□□□ -0.32
TRBV4-1-201ENST00000390357 SDR42E2A6NKP2 422 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 ZNF185O15231 689 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 PRICKLE3O43900 615 aaPredicted RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 DNAJB5O75953 348 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 MATN4O95460 622 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 CBSLP0DN79 551 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 CHRM3P20309 590 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 NR1D1P20393 614 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 ITGAXP20702 1163 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 MAGP20916 626 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 ALAS2P22557 587 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 MGAT1P26572 445 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 PEBP1P30086 187 aaKnown RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 CBSP35520 551 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 EIF3BP55884 814 aaKnown RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 GRB7Q14451 532 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 KIAA0930Q6ICG6 404 aaPredicted RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 OVCH1Q7RTY7 1134 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 LDB1Q86U70 411 aaPredicted RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 TRIM73Q86UV7 250 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 KRT222Q8N1A0 295 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 RASGEF1CQ8N431 466 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 TTC29Q8NA56 475 aaPredicted RBP13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 CLEC1AQ8NC01 280 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 MCUQ8NE86 351 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 FDCSPQ8NFU4 85 aa13.07□□□□□ -0.32
TRBV4-1-201ENST00000390357 SKA2Q8WVK7 121 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms