RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FANCEQ9HB96 536 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 RNF14Q9UBS8 474 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 FBXO5Q9UKT4 447 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 FASNP49327 2511 aaKnown RBP18.28■□□□□ 0.52
CKS1B-203ENST00000368439 PCM1Q15154 2024 aa18.28■□□□□ 0.52
CKS1B-203ENST00000368439 HAUS5O94927 633 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 TCN2P20062 427 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 MPP1Q00013 466 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 DNASE1L3Q13609 305 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 HSP90AA5PQ58FG0 334 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 LCN10Q6JVE6 187 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 CNSTQ6PJW8 725 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 KCNMB4Q86W47 210 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 DNAJC22Q8N4W6 341 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 C2orf73Q8N5S3 287 aaPredicted RBP18.27■□□□□ 0.52
CKS1B-203ENST00000368439 GSDMBQ8TAX9 411 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 HMGCLL1Q8TB92 370 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 CALML6Q8TD86 181 aa18.27■□□□□ 0.52
CKS1B-203ENST00000368439 IARS2Q9NSE4 1012 aaKnown RBP18.27■□□□□ 0.52
CKS1B-203ENST00000368439 C21orf140B9A014 251 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 CTSBP07858 339 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 FURINP09958 794 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 FAM87AP0C7U9 286 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 PRKAR1AP10644 381 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 GABRB3P28472 473 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 PAFAH1B1P43034 410 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 ITGA1P56199 1179 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 MC1RQ01726 317 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 KLHL38Q2WGJ6 581 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.26■□□□□ 0.51
CKS1B-203ENST00000368439 BORAQ6PGQ7 559 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 DSELQ8IZU8 1212 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 C2CD4AQ8NCU7 369 aaPredicted RBP18.26■□□□□ 0.51
CKS1B-203ENST00000368439 SKA2Q8WVK7 121 aaPredicted RBP18.26■□□□□ 0.51
CKS1B-203ENST00000368439 KCNJ9Q92806 393 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 CATSPER2Q96P56 530 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 FAM167BQ9BTA0 163 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 PCMTD2Q9NV79 361 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 KLHL42Q9P2K6 505 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 SERTAD3Q9UJW9 196 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 KCND3Q9UK17 655 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 KLHL20Q9Y2M5 609 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
CKS1B-203ENST00000368439 A0A1W2PPV9 198 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 E5RI56 91 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 MEN1O00255 615 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 MAP3K7O43318 606 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 PSIP1O75475 530 aaKnown RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 SEC31AO94979 1220 aaKnown RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TTC4O95801 387 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 RECKO95980 971 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 ERVK-10P10266 1014 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 MAGP20916 626 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 CCNFP41002 786 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 ITGA8P53708 1063 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TIAL1Q01085 375 aaKnown RBP eCLIP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 C19orf57Q0VDD7 668 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 COL9A2Q14055 689 aaPredicted RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 DEFB110Q30KQ9 67 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 BBS9Q3SYG4 887 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 SPANXN3Q5MJ09 141 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 ZNF385CQ66K41 422 aaPredicted RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 FCRL6Q6DN72 434 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TTC23LQ6PF05 361 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 NEK10Q6ZWH5 1172 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TAX1BP1Q86VP1 789 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 CNTN4Q8IWV2 1026 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 SLC22A18Q96BI1 424 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 FOPNLQ96NB1 174 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 KRT12Q99456 494 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 NAT9Q9BTE0 207 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 RAB11FIP5Q9BXF6 653 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 ACTR5Q9H9F9 607 aaPredicted RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TSR3Q9UJK0 312 aaKnown RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 SLC39A10Q9ULF5 831 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 DHRS7Q9Y394 339 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 COMMD10Q9Y6G5 202 aa18.25■□□□□ 0.51
CKS1B-203ENST00000368439 TLN1Q9Y490 2541 aaKnown RBP18.25■□□□□ 0.51
CKS1B-203ENST00000368439 CCDC88CQ9P219 2028 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ARHGEF33A8MVX0 844 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 E7EQ34 232 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 SMAPO00193 183 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ZNF749O43361 778 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 KATNA1O75449 491 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CREG1O75629 220 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CAPN1P07384 714 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ERGP11308 486 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CYP2A7P20853 494 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ELK3P41970 407 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CYP2A13Q16696 494 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 C16orf46Q6P387 395 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CYHR1Q6ZMK1 362 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 CD200R1Q8TD46 325 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 MR1Q95460 341 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 SNF8Q96H20 258 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 GPR21Q99679 349 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 ARHGAP9Q9BRR9 750 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 AARSD1Q9BTE6 412 aaKnown RBP18.24■□□□□ 0.51
CKS1B-203ENST00000368439 GPR87Q9BY21 358 aa18.24■□□□□ 0.51
CKS1B-203ENST00000368439 SPRTNQ9H040 489 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms