RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 SDHAF3Q9NRP4 125 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 PRKAB1Q9Y478 270 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ROBO3Q96MS0 1386 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 PLGP00747 810 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 HRGP04196 525 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 AHCYP23526 432 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 CHAF1BQ13112 559 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 MINDY4Q4G0A6 757 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ARL13AQ5H913 290 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 ZNF670-ZNF695F2Z2N8 137 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 CTPS1P17812 591 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 GLDCP23378 1020 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 NAE1Q13564 534 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 NXPE1Q8N323 547 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 LIX1Q8N485 282 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ACER1Q8TDN7 264 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 SHC3Q92529 594 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 PCDHB18PQ96TA0 734 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 KATNBL1Q9H079 304 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 LRRC42Q9Y546 428 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 PAGE1O75459 146 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ALPPL2P10696 532 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 TLE2Q04725 743 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 KCTD19Q17RG1 926 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 OR4K2Q8NGD2 314 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ITPAQ9BY32 194 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 IL3P08700 152 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 MSL3P1P0C860 447 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 PTGER3P43115 390 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 GDI2P50395 445 aaKnown RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 FSTL1Q12841 308 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 HSPB3Q12988 150 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 C19orf12Q9NSK7 152 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 CD40LGP29965 261 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 FAM174BQ3ZCQ3 159 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 SLC16A9Q7RTY1 509 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ZBTB8BQ8NAP8 495 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 TEX13DA0A0J9YY54 714 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 MSX2P35548 267 aaPredicted RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 HCAR3P49019 387 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 CRISP1P54107 249 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 SELENOVP59797 346 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 LRIF1Q5T3J3 769 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 GALNT12Q8IXK2 581 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 CLIP4Q8N3C7 705 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 BRSK1Q8TDC3 778 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 EIF2B3Q9NR50 452 aaKnown RBP12.2□□□□□ -0.46
TPR-201ENST00000367478 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 ERVK-11Q9UQG0 969 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 SNX10Q9Y5X0 201 aa12.2□□□□□ -0.46
TPR-201ENST00000367478 BTBD19C9JJ37 291 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 COL28A1Q2UY09 1125 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 TPRG1LQ5T0D9 272 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 ADAM7Q9H2U9 754 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 TOR3AQ9H497 397 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 H7C417 338 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SCAMP3O14828 347 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 ESR1P03372 595 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SNTA1Q13424 505 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 ZNF420Q8TAQ5 688 aaPredicted RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 ASB15Q8WXK1 588 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 IRGQQ8WZA9 623 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 FCRL2Q96LA5 508 aaPredicted RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 TREX2Q9BQ50 279 aaPredicted RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 USP31Q70CQ4 1352 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 PRR36Q9H6K5 1346 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 NTSR2O95665 410 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 PRPS1L1P21108 318 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 PEX2P28328 305 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SMAD3P84022 425 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 TLE3Q04726 772 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SLC13A3Q8WWT9 602 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.46
TPR-201ENST00000367478 C7orf50Q9BRJ6 194 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 COL1A2P08123 1366 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 NWD1Q149M9 1564 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 DLSTP36957 453 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 CCR8P51685 355 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 ENPP2Q13822 863 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 CARTPTQ16568 116 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 ACO2Q99798 780 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 TBL1XR1Q9BZK7 514 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 CENPBD1B2RD01 187 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 E2F3O00716 465 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SCDO00767 359 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 EIF1AYO14602 144 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 OR1F1O43749 312 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 HNRNPH3P31942 346 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 EIF1AXP47813 144 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 NCEH1Q6PIU2 408 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 LRTOMTQ8WZ04 291 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 SLC17A7Q9P2U7 560 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 MADDQ8WXG6 1647 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 HTR3EA5X5Y0 456 aa12.19□□□□□ -0.46
TPR-201ENST00000367478 CSDE1O75534 798 aaKnown RBP12.19□□□□□ -0.46
TPR-201ENST00000367478 CDK14O94921 469 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms