RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ALOXE3Q9BYJ1 711 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 PARVBQ9HBI1 364 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 TBCCD1Q9NVR7 557 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 TRPM5Q9NZQ8 1165 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 GNPTGQ9UJJ9 305 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 ERVK-11Q9UQG0 969 aa17.66■□□□□ 0.42
PTP4A3-202ENST00000349124 STK16O75716 305 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 ACRV1P26436 265 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 GTF2H3Q13889 308 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 SF1Q15637 639 aaKnown RBP17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 SMN1Q16637 294 aaKnown RBP17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 EGFLAMQ63HQ2 1017 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 SNX20Q7Z614 316 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 EID3Q8N140 333 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 AADATQ8N5Z0 425 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 PLD4Q96BZ4 506 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 CPPED1Q9BRF8 314 aaPredicted RBP17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 CWH43Q9H720 699 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 A0A1W2PQ67 120 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 C16orf96A6NNT2 1141 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 RAD23AP54725 363 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 RPS14P62263 151 aaKnown RBP17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 TUBA3CQ13748 450 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 CTF1Q16619 201 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 LRRC73Q5JTD7 316 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 ZNF691Q5VV52 312 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 DOK6Q6PKX4 331 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 ADHFE1Q8IWW8 467 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 PLPP6Q8IY26 295 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 GPR26Q8NDV2 337 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 OR5K1Q8NHB7 308 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 SKA2Q8WVK7 121 aaPredicted RBP17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 MUL1Q969V5 352 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 ALG14Q96F25 216 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 APIPQ96GX9 242 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 USE1Q9NZ43 259 aa17.65■□□□□ 0.42
PTP4A3-202ENST00000349124 EBLN1P0CF75 366 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 PTPN6P29350 595 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 FPGSQ05932 587 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 RNF180Q86T96 592 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 CALHM3Q86XJ0 350 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 SELENOMQ8WWX9 145 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 USP7Q93009 1102 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 ITFG2Q969R8 447 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 PYURFQ96I23 114 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 NTMT1Q9BV86 223 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 VN1R3Q9BXE9 311 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 RIBC2Q9H4K1 309 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 ARL15Q9NXU5 204 aa17.64■□□□□ 0.42
PTP4A3-202ENST00000349124 GLYATL1P3A0A0U1RQE8 302 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 MYO1GB0I1T2 1018 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 CFAP99D6REC4 459 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 H7C4K7 107 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 hCG_2039718K7EN88 272 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 PRAMEF4O60810 478 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 ATP6V1G1O75348 118 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 ITGALP20701 1170 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 CST5P28325 142 aaPredicted RBP17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 CD6P30203 668 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 S100A3P33764 101 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 RPIAP49247 311 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 PHEXP78562 749 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 RELAQ04206 551 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 TAF12Q16514 161 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 CDKN3Q16667 212 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 INO80DQ53TQ3 878 aaPredicted RBP17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 PRAMEF9Q5VWM5 478 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 OR4F3Q6IEY1 312 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 VTCN1Q7Z7D3 282 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 SVOPLQ8N434 492 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 PCDH12Q9NPG4 1184 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 C3orf18Q9UK00 162 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 LRFN2Q9ULH4 789 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.41
PTP4A3-202ENST00000349124 BCKDKO14874 412 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SULT1C4O75897 302 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TRBC1P01850 177 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 NRIP1P48552 1158 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CDH18Q13634 790 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 GRAMD4Q6IC98 578 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ZDHHC21Q8IVQ6 265 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ZCCHC7Q8N3Z6 543 aaKnown RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TMCO5AQ8N6Q1 288 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 GLB1L3Q8NCI6 653 aaPredicted RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TRUB1Q8WWH5 349 aaKnown RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CDK5RAP1Q96SZ6 601 aaKnown RBP17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 EBPLQ9BY08 206 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 SNX5Q9Y5X3 404 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 PIKFYVEQ9Y2I7 2098 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CLDN9O95484 217 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 ZNF12P17014 697 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CCR7P32248 378 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 TGFBR1P36897 503 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 DAPP51397 102 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 HSPA14Q0VDF9 509 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 MTA1Q13330 715 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 DGCR6Q14129 220 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 GBX1Q14549 363 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 PERM1Q5SV97 790 aa17.63■□□□□ 0.41
PTP4A3-202ENST00000349124 CPZQ66K79 652 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms