RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 LMLNQ96KR4 655 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SLC30A2Q9BRI3 323 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 NPLQ9BXD5 320 aaPredicted RBP17.31■□□□□ 0.36
SMAD4-201ENST00000342988 FARS2O95363 451 aaKnown RBP17.31■□□□□ 0.36
SMAD4-201ENST00000342988 CIB1Q99828 191 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 MAGEB17A8MXT2 336 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ALDH3B1P43353 468 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF81P51508 661 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 POM121L1PQ3SYA9 428 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 KCNJ9Q92806 393 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 C17orf62Q9BQA9 187 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 NR2E3Q9Y5X4 410 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF521Q96K83 1311 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 BDNFP23560 247 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 KDELR1P24390 212 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 MIPP30301 263 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 KCNJ5P48544 419 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 RAB5CP51148 216 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 AIF1P55008 147 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 DSG2Q14126 1118 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SCARF1Q14162 830 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 TATDN1Q6P1N9 297 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 HHIPL2Q6UWX4 724 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 STRADAQ7RTN6 431 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 SLC22A8Q8TCC7 542 aa17.31■□□□□ 0.36
SMAD4-201ENST00000342988 PRDX6P30041 224 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 AVL9Q8NBF6 648 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF670Q9BS34 389 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■■■□□ 18.8
SMAD4-201ENST00000342988 CREBL2O60519 120 aaPredicted RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 HECTD2Q5U5R9 776 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CHRAC1Q9NRG0 131 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 TNFRSF10DQ9UBN6 386 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CDK5RAP2Q96SN8 1893 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 NLRP1Q9C000 1473 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SRPRAP08240 638 aaKnown RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 GNSP15586 552 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 IDH3GP51553 393 aaPredicted RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ZACNQ401N2 412 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ZMIZ2Q8NF64 920 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SMPDL3BQ92485 455 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 NCS1P62166 190 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SPOCK1Q08629 439 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF460Q14592 562 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CREB3L2Q70SY1 520 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 MFSD2AQ8NA29 543 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 KLHL6Q8WZ60 621 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 DPF2Q92785 391 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 EXOSC8Q96B26 276 aaKnown RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ASPNQ9BXN1 380 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SNTG2Q9NY99 539 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 KIAA1522Q9P206 1035 aaPredicted RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 RTCAO00442 366 aaKnown RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CXCL8P10145 99 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 IFI35P80217 286 aaPredicted RBP17.3■□□□□ 0.36
SMAD4-201ENST00000342988 HSD11B2P80365 405 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 PCYOX1Q9UHG3 505 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 DPPA5A6NC42 116 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SLC6A6P31641 620 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 GPRC6AQ5T6X5 926 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 TMPRSS7Q7RTY8 843 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 TRAPPC12Q8WVT3 735 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CXorf21Q9HAI6 301 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 TIGARQ9NQ88 270 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 FBXL3Q9UKT7 428 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 CLCA3PQ9Y6N3 262 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ERBB2P04626 1255 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 ADH1AP07327 375 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 KANSL1Q7Z3B3 1105 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SOCS4Q8WXH5 440 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 SAMD10Q9BYL1 202 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 PCDHGA5Q9Y5G8 931 aa17.3■□□□□ 0.36
SMAD4-201ENST00000342988 FRMPD4Q14CM0 1322 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 NPEPPSL1A6NEC2 478 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 GRM6O15303 877 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 NKAPLQ5M9Q1 402 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 TMEM69Q5SWH9 247 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CMKLR1Q99788 373 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 GAL3ST1Q99999 423 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CAPN6Q9Y6Q1 641 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CTPS1P17812 591 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 MC4RP32245 332 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 TMEM185BQ9H7F4 350 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CDH22Q9UJ99 828 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 IL1R1P14778 569 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 CDC25CP30307 473 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 HSPB3Q12988 150 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 RAB30Q15771 203 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 GRIK4Q16099 956 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 C6orf183Q5T699 404 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 ANGEL2Q5VTE6 544 aaKnown RBP17.29■□□□□ 0.36
SMAD4-201ENST00000342988 ZBTB46Q86UZ6 589 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 GSTCDQ8NEC7 633 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 TM9SF2Q99805 663 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
SMAD4-201ENST00000342988 NFASCO94856 1347 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms