RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ITGA1P56199 1179 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 KIR2DS3Q14952 304 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 CCDC137Q6PK04 289 aaKnown RBP16.42■□□□□ 0.22
BRCC3-202ENST00000340647 ATG14Q6ZNE5 492 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 SYVN1Q86TM6 617 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 DCUN1D3Q8IWE4 304 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 NAT8LQ8N9F0 302 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 MCUQ8NE86 351 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 OR2L8Q8NGY9 312 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 TCTN2Q96GX1 697 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 SIGLEC10Q96LC7 697 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 SERPINB12Q96P63 405 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 OSBPL9Q96SU4 736 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 NLNQ9BYT8 704 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 EPN3Q9H201 632 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 SLC22A11Q9NSA0 550 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 TCFL5Q9UL49 500 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 CRYL1Q9Y2S2 319 aa16.42■□□□□ 0.22
BRCC3-202ENST00000340647 FLNCQ14315 2725 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 USP27XA6NNY8 438 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ISM1B1AKI9 464 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 E7EQ34 232 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 GOLGA8MH3BSY2 632 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 AP3B1O00203 1094 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 NDUFS3O75489 264 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 MATN4O95460 622 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 APOA4P06727 396 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 CYP2A7P20853 494 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 PPARGP37231 505 aaPredicted RBP16.41■□□□□ 0.22
BRCC3-202ENST00000340647 BDKRB1P46663 353 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ADARP55265 1226 aaKnown RBP16.41■□□□□ 0.22
BRCC3-202ENST00000340647 TLE1Q04724 770 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 CHAF1BQ13112 559 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ANKRD20A4Q4UJ75 823 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 PTRHD1Q6GMV3 140 aaKnown RBP16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ZNF549Q6P9A3 640 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 TAX1BP1Q86VP1 789 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 LRRC6Q86X45 466 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 CILP2Q8IUL8 1156 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ZBTB2Q8N680 514 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 GIMAP7Q8NHV1 300 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 ACTRT1Q8TDG2 376 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 FAM136AQ96C01 138 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 CLIP3Q96DZ5 547 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 GBP5Q96PP8 586 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 SYNPO2LQ9H987 977 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 FANCEQ9HB96 536 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 MLXIPLQ9NP71 852 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 GNPTGQ9UJJ9 305 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
BRCC3-202ENST00000340647 HEMK1Q9Y5R4 338 aaPredicted RBP16.41■□□□□ 0.22
BRCC3-202ENST00000340647 FAM237BA0A1B0GVD1 139 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 RASGRF2O14827 1237 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 KLK3P07288 261 aaPredicted RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 MLNP12872 115 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 PSMB5P28074 263 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 PTGIRP43119 386 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 RPS15P62841 145 aaKnown RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 FASTKQ14296 549 aaKnown RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 ACSBG2Q5FVE4 666 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 RHBDD2Q6NTF9 364 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 TCTN3Q6NUS6 607 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 NEPROQ6NW34 567 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 DENND6AQ8IWF6 608 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 PANX3Q96QZ0 392 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 ENAMQ9NRM1 1142 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 DHCR7Q9UBM7 475 aaKnown RBP16.4■□□□□ 0.22
BRCC3-202ENST00000340647 SNX12Q9UMY4 172 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 MAN2B2Q9Y2E5 1009 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 SHANK1Q9Y566 2161 aa16.4■□□□□ 0.22
BRCC3-202ENST00000340647 PGRMC1O00264 195 aaKnown RBP16.39■□□□□ 0.21
BRCC3-202ENST00000340647 FANCGO15287 622 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 PHF2O75151 1096 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 OR2B3O76000 313 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 MED26O95402 600 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 IVDP26440 423 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 GRIA3P42263 894 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 CLCN7P51798 805 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 TIAL1Q01085 375 aaKnown RBP eCLIP16.39■□□□□ 0.21
BRCC3-202ENST00000340647 CTBP1Q13363 440 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 NCF4Q15080 339 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-202ENST00000340647 C1orf189Q5VU69 101 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 MRNIPQ6NTE8 343 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 OTOAQ7RTW8 1153 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 ZNF655Q8N720 491 aaPredicted RBP16.39■□□□□ 0.21
BRCC3-202ENST00000340647 HMGCLL1Q8TB92 370 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 ZNF285Q96NJ3 590 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 TCF12Q99081 682 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 TSSK1BQ9BXA7 367 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 PLAC1Q9HBJ0 212 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 TRMT1Q9NXH9 659 aaKnown RBP16.39■□□□□ 0.21
BRCC3-202ENST00000340647 EURLQ9NYK6 297 aa16.39■□□□□ 0.21
BRCC3-202ENST00000340647 DOPEY2Q9Y3R5 2298 aa16.38■□□□□ 0.21
BRCC3-202ENST00000340647 ARGFXA6NJG6 315 aa16.38■□□□□ 0.21
BRCC3-202ENST00000340647 SDR42E2A6NKP2 422 aa16.38■□□□□ 0.21
BRCC3-202ENST00000340647 F8W8V4 182 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms