RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 ERV3-1Q14264 604 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 GRB7Q14451 532 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 CRYMQ14894 314 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 MORF4L2Q15014 288 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 SF1Q15637 639 aaKnown RBP10.95□□□□□ -0.66
MRPL55-203ENST00000336520 ZIC1Q15915 447 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 DEFB109BQ30KR1 87 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 HSP90AA5PQ58FG0 334 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 ACSBG2Q5FVE4 666 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 ATP1A1-AS1Q5TC04 95 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 PRAMEF17Q5VTA0 474 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FAM199XQ6PEV8 388 aaPredicted RBP10.95□□□□□ -0.66
MRPL55-203ENST00000336520 KCNMB4Q86W47 210 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FAM20CQ8IXL6 584 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 PDIK1LQ8N165 341 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 EXD3Q8N9H8 876 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 LMNTD1Q8N9Z9 388 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 LINC01555Q8NAE3 123 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FLVCR1-AS1Q8TAF5 88 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 TRIM51Q9BSJ1 452 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 NAT9Q9BTE0 207 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 MENTQ9BUN1 341 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 ACTL8Q9H568 366 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FAM60AQ9NP50 221 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 IARS2Q9NSE4 1012 aaKnown RBP10.95□□□□□ -0.66
MRPL55-203ENST00000336520 INTS7Q9NVH2 962 aaKnown RBP10.95□□□□□ -0.66
MRPL55-203ENST00000336520 RNF14Q9UBS8 474 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FBXO5Q9UKT4 447 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.95□□□□□ -0.66
MRPL55-203ENST00000336520 FAM169AQ9Y6X4 670 aa10.95□□□□□ -0.66
MRPL55-203ENST00000336520 SPTBP11277 2137 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CDC14CA4D256 554 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 KRT87PA6NCN2 255 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 SMAPO00193 183 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 MEN1O00255 615 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 TERTO14746 1132 aaKnown RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 ZNF749O43361 778 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CREG1O75629 220 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CATP04040 527 aaKnown RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 HBQ1P09105 142 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 ERVK-10P10266 1014 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 MAGP20916 626 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 IVDP26440 423 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 POLE2P56282 527 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 GBX1Q14549 363 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 HIF1AQ16665 826 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 KLHL38Q2WGJ6 581 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CCSMST1Q4G0I0 132 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 MSS51Q4VC12 460 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CRTC2Q53ET0 693 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 SPANXN3Q5MJ09 141 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 HP1BP3Q5SSJ5 553 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 C17orf53Q8N3J3 647 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 SLC38A9Q8NBW4 561 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 APOBEC4Q8WW27 367 aaKnown RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 KCNJ9Q92806 393 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CFAP36Q96G28 342 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 SNF8Q96H20 258 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 LRFN5Q96NI6 719 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 EBNA1BP2Q99848 306 aaKnown RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 GPR87Q9BY21 358 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 TRIM31Q9BZY9 425 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 TWSG1Q9GZX9 223 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 CHST8Q9H2A9 424 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 AKIRIN1Q9H9L7 192 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 PPANQ9NQ55 473 aaKnown RBP10.94□□□□□ -0.66
MRPL55-203ENST00000336520 FAM114A2Q9NRY5 505 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 GALPQ9UBC7 116 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 PLCL2Q9UPR0 1127 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 POLHQ9Y253 713 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 KLHL20Q9Y2M5 609 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 PCDHGA6Q9Y5G7 932 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 COMMD10Q9Y6G5 202 aa10.94□□□□□ -0.66
MRPL55-203ENST00000336520 GCN1Q92616 2671 aaKnown RBP10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ARHGEF33A8MVX0 844 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 C9J4A7 227 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ZSCAN9O15535 394 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-203ENST00000336520 VPS26AO75436 327 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 HAUS5O94927 633 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 MATN4O95460 622 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ATXN8OSP0DMR3 200 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 AGXTP21549 392 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 PTPN4P29074 926 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 CASQ1P31415 396 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 CLCN7P51798 805 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ITGA8P53708 1063 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ARL4CP56559 192 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 RPS18P62269 152 aaKnown RBP10.93□□□□□ -0.66
MRPL55-203ENST00000336520 NFATC3Q12968 1075 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 KCNAB2Q13303 367 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 CUL1Q13616 776 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 TSTA3Q13630 321 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-203ENST00000336520 PTCHD3Q3KNS1 767 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ZNF549Q6P9A3 640 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 ZNF605Q86T29 641 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 SYTL1Q8IYJ3 562 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 DSELQ8IZU8 1212 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 GIMAP7Q8NHV1 300 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 SEC14L1Q92503 715 aa10.93□□□□□ -0.66
MRPL55-203ENST00000336520 INPP5DQ92835 1189 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms