RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 INTS7Q9NVH2 962 aaKnown RBP13.59□□□□□ -0.23
SF1-202ENST00000334944 AFF4Q9UHB7 1163 aaKnown RBP13.59□□□□□ -0.23
SF1-202ENST00000334944 ASPDHA6ND91 283 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 E2F3O00716 465 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 RASAL1O95294 804 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 RPS17P08708 135 aaKnown RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 HTR1AP08908 422 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 SLC6A2P23975 617 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 PSMA4P25789 261 aaKnown RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 COLEC12Q5KU26 742 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 PTRHD1Q6GMV3 140 aaKnown RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 TSPAN33Q86UF1 283 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 ELMOD2Q8IZ81 293 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 ADAMTS19Q8TE59 1207 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 ZNF296Q8WUU4 475 aaPredicted RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 OSCP1Q8WVF1 389 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 PEX13Q92968 403 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 LRRC58Q96CX6 371 aa13.58□□□□□ -0.23
SF1-202ENST00000334944 CENPNQ96H22 339 aaPredicted RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 SDR39U1Q9NRG7 319 aaPredicted RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 THG1LQ9NWX6 298 aaKnown RBP13.58□□□□□ -0.23
SF1-202ENST00000334944 CAPN1P07384 714 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 IL12AP29459 219 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 HSPA7P48741 367 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 STK19P49842 368 aaPredicted RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 SMARCB1Q12824 385 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 CTF1Q16619 201 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 RFLNAQ6ZTI6 216 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 GET4Q7L5D6 327 aaPredicted RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 C2orf15Q8WU43 125 aaKnown RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 TMEM169Q96HH4 297 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 TMEM246Q9BRR3 403 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 IL17CQ9P0M4 197 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 ARIH1Q9Y4X5 557 aaPredicted RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 GPR45Q9Y5Y3 372 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 PIKFYVEQ9Y2I7 2098 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 SYCE1LA8MT33 242 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 AP3D1O14617 1153 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 DYRK3O43781 588 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 CKMP06732 381 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 DGKQP52824 942 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 ATP6V0D1P61421 351 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 ZCCHC8Q6NZY4 707 aaKnown RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 IL27RAQ6UWB1 636 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 GPRIN3Q6ZVF9 776 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 SERPINA9Q86WD7 417 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 NKAPQ8N5F7 415 aaKnown RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 ASCC1Q8N9N2 400 aaKnown RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 SPERTQ8NA61 448 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 METTL6Q8TCB7 284 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 PXYLP1Q8TE99 480 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 RPL3LQ92901 407 aaKnown RBP13.58□□□□□ -0.24
SF1-202ENST00000334944 ITCHQ96J02 903 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 TTYH2Q9BSA4 534 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 TMEM175Q9BSA9 504 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 BBS2Q9BXC9 721 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 ASB8Q9H765 288 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 POPDC3Q9HBV1 291 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 FAM8A1Q9UBU6 413 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 SARDHQ9UL12 918 aa13.58□□□□□ -0.24
SF1-202ENST00000334944 ABCB7O75027 752 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 CTSOP43234 321 aaPredicted RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 CLCN7P51798 805 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 VEPH1Q14D04 833 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 TXNDC15Q96J42 360 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 TUBA1CQ9BQE3 449 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 ARMC1Q9NVT9 282 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 RGS13O14921 159 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 HOXA2O43364 376 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 POLR2EP19388 210 aaKnown RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 P2RX3P56373 397 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 DEFB103AP81534 67 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 TRAP1Q12931 704 aaKnown RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 C8orf82Q6P1X6 216 aaPredicted RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 BLOC1S3Q6QNY0 202 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 DCP2Q8IU60 420 aaKnown RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
SF1-202ENST00000334944 ADGRG5Q8IZF4 528 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 ADGRG2Q8IZP9 1017 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 MTFMTQ96DP5 389 aaKnown RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 MYO19Q96H55 970 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 PPM1MQ96MI6 270 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 SLC7A5P2Q9GIP4 190 aa13.57□□□□□ -0.24
SF1-202ENST00000334944 FARSBQ9NSD9 589 aaKnown RBP13.57□□□□□ -0.24
SF1-202ENST00000334944 CDK2AP1O14519 115 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 UGT2B11O75310 529 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 ABLIM3O94929 683 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 TCF3P15923 654 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 GP2P55259 537 aaKnown RBP13.56□□□□□ -0.24
SF1-202ENST00000334944 KCNK10P57789 538 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 GALK2Q01415 458 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 TLE2Q04725 743 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 STEAP3Q658P3 488 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 Q6ZSR9 355 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 ZSWIM9Q86XI8 627 aa13.56□□□□□ -0.24
SF1-202ENST00000334944 GRAMD2AQ8IUY3 354 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms