RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 VPS11Q9H270 941 aa17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 INTS7Q9NVH2 962 aaKnown RBP17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 ARL15Q9NXU5 204 aa17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 LGALS13Q9UHV8 139 aa17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 POMT2Q9UKY4 750 aa17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 DCHS1Q96JQ0 3298 aa17.34■□□□□ 0.37
SSSCA1-201ENST00000309328 GSAPA4D1B5 854 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 KERAO60938 352 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 CCNDBP1O95273 360 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SLC16A8O95907 504 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 GSTA1P08263 222 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 ANXA5P08758 320 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 RBP1P09455 135 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 KRT15P19012 456 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 CSF2RBP32927 897 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 PNLIPRP1P54315 467 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 PPP1R3AQ16821 1122 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SLC5A12Q1EHB4 618 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 N4BP2L1Q5TBK1 243 aaPredicted RBP17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 IRGCQ6NXR0 463 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SYTL1Q8IYJ3 562 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 IQCKQ8N0W5 287 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 PKP4Q99569 1192 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 CMKLR1Q99788 373 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 NUDT22Q9BRQ3 303 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 C1GALT1Q9NS00 363 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 EURLQ9NYK6 297 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 ACTR10Q9NZ32 417 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SENP1Q9P0U3 644 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SEMA5BQ9P283 1151 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 TBK1Q9UHD2 729 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 ADAMTS6Q9UKP5 1117 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 TMCO1Q9UM00 188 aa17.33■□□□□ 0.36
SSSCA1-201ENST00000309328 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 IGHV5-10-1A0A0J9YXX1 117 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 NPEPPSL1A6NEC2 478 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 BTN3A3O00478 584 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 CSO75390 466 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 RFPL1O75677 317 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 IPO13O94829 963 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 S100BP04271 92 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 TPBGLP0DKB5 382 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 POLR2CP19387 275 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 OAS2P29728 719 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 SLCO1A2P46721 670 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 TSNQ15631 228 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 SPESP1Q6UW49 350 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 GPSM1Q86YR5 675 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 CENPLQ8N0S6 344 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 EPS8L3Q8TE67 593 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 DENND1AQ8TEH3 1009 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 DLG3Q92796 817 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 FBXL8Q96CD0 374 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 TGM7Q96PF1 710 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 RUFY1Q96T51 708 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 STMN4Q9H169 189 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 XKR8Q9H6D3 395 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 CNOT10Q9H9A5 744 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 IGSF5Q9NSI5 407 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 UTP6Q9NYH9 597 aaKnown RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 ATXN7L1Q9ULK2 861 aaPredicted RBP17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 RNF112Q9ULX5 631 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 PCDHB11Q9Y5F2 797 aa17.32■□□□□ 0.36
SSSCA1-201ENST00000309328 ASXL3Q9C0F0 2248 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 TLDC2A0PJX2 215 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CDC7O00311 574 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 RASSF9O75901 435 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 TFEBP19484 476 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PRDX3P30048 256 aaKnown RBP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CSTF2P33240 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 MLLT3P42568 568 aaPredicted RBP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PGGT1BP53609 377 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 ABATP80404 500 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CFHR1Q03591 330 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 TGFBIQ15582 683 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PHKG1Q16816 387 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PHF19Q5T6S3 580 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 SULT1C3Q6IMI6 304 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 ARHGAP22Q7Z5H3 698 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CLEC14AQ86T13 490 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 ISCA2Q86U28 154 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 LINC01555Q8NAE3 123 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 AGBL5Q8NDL9 886 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 MZB1Q8WU39 189 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 ZNF480Q8WV37 535 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 EGFL8Q99944 293 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 ZNF768Q9H5H4 540 aaKnown RBP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CCDC177Q9NQR7 707 aaPredicted RBP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 NUDT4Q9NZJ9 180 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 STOX2Q9P2F5 926 aaPredicted RBP17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 PLAGL1Q9UM63 463 aa17.31■□□□□ 0.36
SSSCA1-201ENST00000309328 CCDC187A0A096LP49 1063 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 GOLGA6L10A6NI86 522 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 SMIM23A6NLE4 172 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 ISM1B1AKI9 464 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 E7ENX8 843 aa17.3■□□□□ 0.36
SSSCA1-201ENST00000309328 ZBTB11O95625 1053 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms