RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FBXL3Q9UKT7 428 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 ABCG2Q9UNQ0 655 aa11.83□□□□□ -0.52
SMG6-201ENST00000263073 MAGEA2P43356 314 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CBX5P45973 191 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 AIF1P55008 147 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 RPA4Q13156 261 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ANKDD1AQ495B1 522 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 RBM48Q5RL73 367 aaKnown RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 OR4C6Q8NH72 309 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 C8orf48Q96LL4 319 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 GAL3ST4Q96RP7 486 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 TCF7L1Q9HCS4 588 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 COQ3Q9NZJ6 369 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 GALPQ9UBC7 116 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ARHGAP23Q9P227 1491 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 DLX3O60479 287 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 HLA-DQB2P05538 268 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CLCN4P51793 760 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PGDP52209 483 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 TUSC3Q13454 348 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PTPRCAPQ14761 206 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 OGFRL1Q5TC84 451 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 NCBP2-AS2Q69YL0 99 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ZNF782Q6ZMW2 699 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 SYNPOQ8N3V7 929 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CNIH3Q8TBE1 160 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ISOC1Q96CN7 298 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PRR11Q96HE9 360 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 HIPK3Q9H422 1215 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 TREM1Q9NP99 234 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 BCL9O00512 1426 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 WRBO00258 174 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CHRM1P11229 460 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 FNTBP49356 437 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PLPP4Q5VZY2 271 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CES5AQ6NT32 575 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 TMEM220Q6QAJ8 160 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 SNX20Q7Z614 316 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 HAVCR1Q96D42 359 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ZC3H10Q96K80 434 aaKnown RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 MGME1Q9BQP7 344 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CHMP1AQ9HD42 196 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 LHCGRP22888 699 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ACSL1P33121 698 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PRAMEF17Q5VTA0 474 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ARL9Q6T311 187 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ZNF572Q7Z3I7 529 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 KCNN2Q9H2S1 579 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 GTF2IRD1Q9UHL9 959 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ADAMTS6Q9UKP5 1117 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 UBR1Q8IWV7 1749 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 TLR4O00206 839 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 MPZL2O60487 215 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CLDN11O75508 207 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 APOL3O95236 402 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 PGAM2P15259 253 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 RHOQP17081 205 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ARL2P36404 184 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 GSCP56915 257 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 RAB2AP61019 212 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 OGDHQ02218 1023 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 CRB2Q5IJ48 1285 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 ZNF431Q8TF32 576 aaPredicted RBP11.82□□□□□ -0.52
SMG6-201ENST00000263073 NANSQ9NR45 359 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 HSPB11Q9Y547 144 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 KCTD3Q9Y597 815 aa11.82□□□□□ -0.52
SMG6-201ENST00000263073 A0A0G2JPF8 293 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 HNRNPCL3B7ZW38 293 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 MMP3P08254 477 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 HNRNPCL4P0DMR1 293 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 GSK3BP49841 420 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 TRPM4Q8TD43 1214 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 BIRC7Q96CA5 298 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 RIPOR3Q96MK2 946 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 MARK1Q9P0L2 795 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 SLC27A6Q9Y2P4 619 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 MYPNQ86TC9 1320 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 IGLV3-22A0A075B6J6 115 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 ISPDA4D126 451 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 IMPDH1P20839 514 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 MAT2AP31153 395 aaKnown RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 SLC15A1P46059 708 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 SEC13P55735 322 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 AP3S2P59780 193 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 ADAM8P78325 824 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
SMG6-201ENST00000263073 PLEKHG6Q3KR16 790 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 SPATC1Q76KD6 591 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 RFKQ969G6 155 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 JSRP1Q96MG2 331 aaPredicted RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 KXD1Q9BQD3 176 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 SLC35A5Q9BS91 424 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 CCDC177Q9NQR7 707 aaPredicted RBP11.81□□□□□ -0.52
SMG6-201ENST00000263073 PTPRJQ12913 1337 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 CDC7O00311 574 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 CYP3A5P20815 502 aa11.81□□□□□ -0.52
SMG6-201ENST00000263073 ECHS1P30084 290 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms