RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CSN2P05814 226 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 GDI1P31150 447 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ACTR1BP42025 376 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 DGKEP52429 567 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 ACTR1AP61163 376 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 CRHR2Q13324 411 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 TMEM198Q66K66 360 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 UFD1Q92890 307 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 BRD7Q9NPI1 651 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PDE10AQ9Y233 779 aa11.86□□□□□ -0.51
COL8A1-201ENST00000261037 PRAMEF33A0A0G2JMD5 474 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 MPZL2O60487 215 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PRAMEF10O60809 474 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ECI2O75521 394 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 GPIP06744 558 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ACVRL1P37023 503 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ECT2LQ008S8 904 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ROR2Q01974 943 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 MSL3Q8N5Y2 521 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 C7orf57Q8NEG2 295 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 RASSF5Q8WWW0 418 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 DMRTB1Q96MA1 342 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PCBD2Q9H0N5 130 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF282Q9UDV7 671 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 MAN2B2Q9Y2E5 1009 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ABCC6O95255 1503 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 A0A1W2PRB8 838 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TMEM233B4DJY2 109 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 UNGP13051 313 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CLCN4P51793 760 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 AKR1D1P51857 326 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 BTN3A2P78410 334 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 FAM92BQ6ZTR7 304 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 LYSMD3Q7Z3D4 306 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 RASGRP3Q8IV61 690 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 OR5M3Q8NGP4 307 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 C2orf15Q8WU43 125 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TNFAIP8L1Q8WVP5 186 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 HAVCR1Q96D42 359 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 SLC35A5Q9BS91 424 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TOR3AQ9H497 397 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 RUVBL1Q9Y265 456 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CCND3P30281 292 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 DHPSP49366 369 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CCR8P51685 355 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CHAF1BQ13112 559 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 MGME1Q9BQP7 344 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 SMG9Q9H0W8 520 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 RNF39Q9H2S5 420 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 EIF2B3Q9NR50 452 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 XRN1Q8IZH2 1706 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 DAPL1A0PJW8 107 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 DPPA5A6NC42 116 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 K7EPI3 171 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 WNT9AO14904 365 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 SLC7A4O43246 635 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PGLSO95336 258 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 KLK1P06870 262 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ALPPL2P10696 532 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TSPAN5P62079 268 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 HERVK_113P63132 956 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 GPM6BQ13491 265 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CHRNA6Q15825 494 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 LACTB2Q53H82 288 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 DNAJB7Q7Z6W7 309 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 NXPE1Q8N323 547 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TMEM145Q8NBT3 493 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 POF1BQ8WVV4 589 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ERVK-6Q9BXR3 956 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CST11Q9H112 138 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CLDND1Q9NY35 253 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PCDHGA11Q9Y5H2 935 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ELOA3DA6NLF2 546 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CXorf49A8MYA2 514 aaPredicted RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 SEMA3DO95025 777 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ADH5P11766 374 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 GNAZP19086 355 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PTNP21246 168 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 RPL10P27635 214 aaKnown RBP11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PDX1P52945 283 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ELOA3BQ3SY89 546 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 HFE2Q6ZVN8 426 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ELOA3Q8NG57 546 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 ZFP3Q96NJ6 502 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 MCCC2Q9HCC0 563 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 TCF7L1Q9HCS4 588 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 CNTN3Q9P232 1028 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 COMMD3Q9UBI1 195 aa11.85□□□□□ -0.51
COL8A1-201ENST00000261037 PCDHGA12O60330 932 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CPNE3O75131 537 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 VARSP26640 1264 aaKnown RBP11.84□□□□□ -0.51
COL8A1-201ENST00000261037 CCNFP41002 786 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 ADGRE1Q14246 886 aa11.84□□□□□ -0.51
COL8A1-201ENST00000261037 EIPR1Q53HC9 387 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms