RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PADI2Q9Y2J8 665 aa18.3■□□□□ 0.52
TM6SF1-201ENST00000258909 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
TM6SF1-201ENST00000258909 GOLGA8KD6RF30 607 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 GOLGA8TH3BQL2 631 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 CNOT3O75175 753 aaKnown RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 SLCO2B1O94956 709 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 MGAT1P26572 445 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 CXCR5P32302 372 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 GRIA3P42263 894 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 UQCRFS1P47985 274 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 CD97P48960 835 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 DCDP81605 110 aaKnown RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 MED25Q71SY5 747 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 RAB43Q86YS6 212 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 DCUN1D3Q8IWE4 304 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 OTUD6BQ8N6M0 293 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 TMEM102Q8N9M5 508 aaPredicted RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 SKA2Q8WVK7 121 aaPredicted RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 DHRS4Q9BTZ2 278 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 P2RY12Q9H244 342 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 SYBUQ9NX95 663 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 EURLQ9NYK6 297 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 TSR3Q9UJK0 312 aaKnown RBP18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 NFS1Q9Y697 457 aa18.29■□□□□ 0.52
TM6SF1-201ENST00000258909 SPTAN1Q13813 2472 aaKnown RBP18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 TCRBV7S3A2A0A539 114 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 MASP2O00187 686 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 CEP104O60308 925 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 NDUFS3O75489 264 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 RPN2P04844 631 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 ALAS2P22557 587 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 FOLR3P41439 243 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 EIF3BP55884 814 aaKnown RBP18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 TMED2Q15363 201 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 TRIP13Q15645 432 aaPredicted RBP18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 CCSMST1Q4G0I0 132 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 TLDC1Q6P9B6 456 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 DRICH1Q6PGQ1 229 aaPredicted RBP18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 UNC5DQ6UXZ4 953 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 MRGPREQ86SM8 312 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 CPT1CQ8TCG5 803 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 UBE2Q2Q8WVN8 375 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 COL26A1Q96A83 441 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 MFSD3Q96ES6 412 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 NDC1Q9BTX1 674 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 IL22Q9GZX6 179 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 BFARQ9NZS9 450 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 NDOR1Q9UHB4 597 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 GNPTGQ9UJJ9 305 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 SLC39A10Q9ULF5 831 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 TTC7AQ9ULT0 858 aaPredicted RBP18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 ZNF451Q9Y4E5 1061 aa18.28■□□□□ 0.52
TM6SF1-201ENST00000258909 RASGRF2O14827 1237 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 VAPBO95292 243 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 CCDC175P0C221 793 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 BDKRB1P46663 353 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 NPY2RP49146 381 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 RRADP55042 308 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 SF1Q15637 639 aaKnown RBP18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 NKAIN1Q4KMZ8 207 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 FCRL6Q6DN72 434 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 MCATQ8IVS2 390 aaKnown RBP18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 EFCAB3Q8N7B9 438 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 OR2L8Q8NGY9 312 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 GSDMBQ8TAX9 411 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 PROKR1Q8TCW9 393 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 FAM136AQ96C01 138 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 C17orf62Q9BQA9 187 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 SLC22A11Q9NSA0 550 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 GPR83Q9NYM4 423 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 SRPK3Q9UPE1 567 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 SHANK1Q9Y566 2161 aa18.27■□□□□ 0.52
TM6SF1-201ENST00000258909 CLEC18AA5D8T8 446 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 GNLYP22749 145 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 MCM3P25205 808 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 ARNTP27540 789 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 FMO4P31512 558 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 VPS41P49754 854 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 SSPNQ14714 243 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 PRR30Q53SZ7 412 aaPredicted RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 CTSL3PQ5NE16 218 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 CNSTQ6PJW8 725 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 CLEC18BQ6UXF7 455 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 TTLL10Q6ZVT0 673 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 OTOAQ7RTW8 1153 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 CLEC18CQ8NCF0 446 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 SLC22A18Q96BI1 424 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 PANX3Q96QZ0 392 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 G3BP2Q9UN86 482 aaKnown RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 VPS4BO75351 444 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 AVILO75366 819 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 SORBS2O94875 1100 aaKnown RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 S1PR4O95977 384 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 PSMB5P28074 263 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 JMJD6Q6NYC1 403 aaPredicted RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 MRPL14Q6P1L8 145 aaKnown RBP18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 LRRC8BQ6P9F7 803 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 TTC23LQ6PF05 361 aa18.26■□□□□ 0.51
TM6SF1-201ENST00000258909 FIGLAQ6QHK4 219 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms