RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ZNF358Q9NW07 568 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SCP2D1Q9UJQ7 156 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 H3BM21 787 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 IFNA21P01568 189 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 H1F0P07305 194 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 PGDP52209 483 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 NCEH1Q6PIU2 408 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CHST4Q8NCG5 386 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 RIT1Q92963 219 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 RPIAP49247 311 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 MYLK3Q32MK0 819 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PIGGQ5H8A4 983 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 DCAF12L1Q5VU92 463 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 FAM91A1Q658Y4 838 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 BIRC7Q96CA5 298 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 ZNF3P17036 446 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 C6orf141Q5SZD1 244 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 TSPAN33Q86UF1 283 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 SLC43A3Q8NBI5 491 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CDH7Q9ULB5 785 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 OR6C75A6NL08 312 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 GNAO1P09471 354 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PVALBP20472 110 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 MYF6P23409 242 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PPP5CP53041 499 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 CDKL1Q00532 357 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 KXD1Q9BQD3 176 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 TNFRSF10DQ9UBN6 386 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 POMCP01189 267 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 C4BPAP04003 597 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 ITPKAP23677 461 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 LY6KQ17RY6 165 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 RIC1Q4ADV7 1423 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 GET4Q7L5D6 327 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 OR8J3Q8NGG0 315 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 JPH3Q8WXH2 748 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 SMCO3A2RU48 225 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 GNRH1P01148 92 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 OR3A3P47888 321 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 OR3A2P47893 321 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 HNRNPDQ14103 355 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 TNKS2Q9H2K2 1166 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 PAQR5Q9NXK6 330 aaPredicted RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 EIF2B4Q9UI10 523 aaKnown RBP8.06□□□□□ -1.12
APOB-201ENST00000233242 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 N6AMT1Q9Y5N5 214 aa8.06□□□□□ -1.12
APOB-201ENST00000233242 STK25O00506 426 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 OR4F21O95013 312 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ZNF132P52740 706 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TAF1AQ15573 450 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 TSTQ16762 297 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 ZNF782Q6ZMW2 699 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 MARCH9Q86YJ5 346 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CXorf40AQ8TE69 158 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HACL1Q9UJ83 578 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HCN4Q9Y3Q4 1203 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PPLO60437 1756 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 NINQ8N4C6 2090 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SCAMP3O14828 347 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 GRID2O43424 1007 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SNHG28P0DPA3 235 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TAS2R39P59534 338 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 C2orf80Q0P641 193 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CBFBQ13951 182 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 XKR4Q5GH76 650 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CRB2Q5IJ48 1285 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 GRHL2Q6ISB3 625 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PSKH2Q96QS6 385 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 BPIFA1Q9NP55 256 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SPEF2Q9C093 1822 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 COL1A2P08123 1366 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 BOLA2-SMG1P6H3BVE0 249 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CRYZL1O95825 349 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 GRK5P34947 590 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HOXD12P35452 270 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 YAP1P46937 504 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 RASGEF1BQ0VAM2 473 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 KANK2Q63ZY3 851 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ENAMQ9NRM1 1142 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 TRAV19A0A0A6YYK7 116 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SCARB2Q14108 478 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 ZMYND11Q15326 602 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 C9orf57Q5W0N0 161 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 RAET1GQ6H3X3 334 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 OTOP3Q7RTS5 596 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 UBE2J2Q8N2K1 259 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 KAT2AQ92830 837 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 MAELQ96JY0 434 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 TCEAL7Q9BRU2 100 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CDADC1Q9BWV3 514 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 SMPD4Q9NXE4 827 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 NMBRP28336 390 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 HTR2BP41595 481 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 AP1S1P61966 158 aa8.05□□□□□ -1.12
APOB-201ENST00000233242 CCBE1Q6UXH8 406 aaPredicted RBP8.05□□□□□ -1.12
APOB-201ENST00000233242 ASB18Q6ZVZ8 466 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms