RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Lmcd1Q8VEE1 365 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Pdia5Q921X9 517 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Me2Q99KE1 589 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm4756A0A140LIS8 335 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm11127A7VMS2 374 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zscan5bB2RTN3 468 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm5134E9QAB5 671 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm10269G3UWD7 123 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cdh1P09803 884 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Stoml3Q6PE84 287 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Itih5Q8BJD1 952 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Psma6Q9QUM9 246 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r34E9PVI0 852 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r41E9Q5C7 852 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r40F6W043 852 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r37F8VQD3 802 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r36K7N741 852 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prl2c3P04768 224 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gh1P06880 216 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 TpbglQ8C013 384 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn1r228Q8R2A7 333 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 AuhQ9JLZ3 314 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Arhgef11Q68FM7 1552 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Ebf2O08792 575 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 B3galt2O54905 422 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gstm1P10649 218 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Bmp6P20722 510 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Sema3cQ62181 751 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Pgm5Q8BZF8 567 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Irak3Q8K4B2 609 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr1395Q8VGD7 317 aa18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Srfbp1Q9CZ91 441 aaKnown RBP18.1■□□□□ 0.49
Trim71-201ENSMUST00000111816 Serpine1P22777 402 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tmem65Q4VAE3 234 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr135Q8VEY4 312 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 LsrQ99KG5 594 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc5a5Q99PN0 618 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Smarcb1Q9Z0H3 385 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cep170Q6A065 1588 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 LatO54957 242 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 SprQ64105 261 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prl3a1Q78Y73 227 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Hsdl1Q8BTX9 330 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 DnerQ8JZM4 737 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Cotl1Q9CQI6 142 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Nid2O88322 1403 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Hcn3O88705 779 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 TrhrP21761 393 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tas2r16P59529 299 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Micu2Q8CD10 432 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Dnajc22Q8CHS2 339 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Nt5c1bQ91YE9 573 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tmem159Q922Z1 161 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Nat8lQ3UGX3 299 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm732Q3V0P9 516 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prmt8Q6PAK3 394 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Dctn4Q8CBY8 467 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Spon1Q8VCC9 807 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Slc9a3r1P70441 355 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Acsf2Q8VCW8 615 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Kdelr1Q99JH8 212 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Ripk3Q9QZL0 486 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm37596A0A0A6YXL2 336 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Smok4aA0JLX3 433 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rnf113a2Q14B01 337 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 FcamrQ2TB54 535 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 D630039A03RikQ8K0M7 236 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rpl14Q9CR57 217 aaKnown RBP18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Kcne2Q9D808 123 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Otud3B1AZ99 396 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Ism2D3Z6A3 493 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr1121L7MTT1 314 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 JchainP01592 159 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Nr5a2P45448 560 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 LtbrP50284 415 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Txn2P97493 166 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr1231Q7TQZ8 313 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Timm29Q8BGX2 266 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 FntbQ8K2I1 437 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Olfr955Q9EQ97 314 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Yy2Q3TTC2 378 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Eif1aQ60872 144 aaKnown RBP18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Tbccd1Q640P7 552 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Eif1axQ8BMJ3 144 aaKnown RBP18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zbtb26Q8C8S0 451 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Asb17Q8VHP9 295 aa18.09■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rnf17Q99MV7 1640 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Prdm12A2AJ77 365 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm3676D3Z236 184 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Vmn2r17E9PYF5 849 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm3573L7N292 184 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Fkbp7O54998 218 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Apoa2P09813 102 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Orai3Q6P8G8 290 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Rab9bQ8BHH2 201 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 NkrfQ8BY02 690 aaKnown RBP18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Zfp446Q8C9M8 523 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Mcoln2Q8K595 566 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 1700001F09RikQ9DAR5 184 aa18.08■□□□□ 0.49
Trim71-201ENSMUST00000111816 Gm3543D3Z235 184 aa18.08■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms