RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Dcaf12l1Q8CBW4 501 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ago1Q8CJG1 857 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Hmgcs1Q8JZK9 520 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tmem221Q8K071 230 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn1r38Q8R2E1 302 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vwa1Q8R2Z5 415 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Lmcd1Q8VEE1 365 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr807Q8VGI9 311 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rsph1Q8VIG3 301 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Uts2rQ8VIH9 385 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 EtfaQ99LC5 333 aaKnown RBP11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Kbtbd12Q9D618 625 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Glod5Q9D8I3 148 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Usp12Q9D9M2 370 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Capn10Q9ESK3 666 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nipa2Q9JJC8 359 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Chrna6Q9R0W9 494 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 NbnQ9R207 751 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 HaspinQ9Z0R0 754 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Plxna1P70206 1894 aa11.33□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Golga4Q91VW5 2238 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Btbd35f28A2CFD5 498 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Btbd35f30J3QML3 498 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Itgb1P09055 798 aaKnown RBP11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Scg5P12961 212 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Il1rnP25085 178 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Grik2P39087 908 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nat1P50294 290 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 DbtP53395 482 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 NficP70255 439 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 TekQ02858 1122 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Zdhhc11Q14AK4 347 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 LvrnQ2KHK3 559 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ulk3Q3U3Q1 472 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cmpk2Q3U5Q7 447 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MthfsdQ3URQ7 372 aaKnown RBP11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 GstcdQ5RL51 634 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nfe2l2Q60795 597 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 BadQ61337 204 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Eif2b4Q61749 524 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Znf366Q6NS86 746 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vac14Q80WQ2 782 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 TxlngQ8BHN1 524 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Mpp7Q8BVD5 576 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Phf11aQ8BVM9 293 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Rcor1Q8CFE3 480 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn1r22Q8R2D1 302 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Vmn1r6Q8R2D4 303 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ptgr2Q8VDQ1 351 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Taf12Q8VE65 161 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1310Q8VF85 312 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1047Q8VGS0 319 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slco6d1Q9D5W6 683 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tex22Q9D9U4 189 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pak1ip1Q9DCE5 382 aaKnown RBP11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fezf2Q9ESP5 455 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ifi213D3Z5G0 586 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cyp2j8G3UZ38 503 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm21897J3KMP5 500 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm21750L7N228 499 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cdk2ap1O35207 114 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MaxP28574 160 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Sept4P28661 478 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 CartptP56388 129 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 NfycP70353 335 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gm7030Q0WXH6 285 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 DtlQ3TLR7 729 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ipcef1Q5DU31 406 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Cdkn2cQ60772 168 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Scn4bQ7M729 228 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr664Q7TRP5 306 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Slc6a15Q8BG16 729 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Elmo1Q8BPU7 727 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 B430218F22RikQ8BQR5 223 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Q8CC96 669 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Olfr1353Q8VGU8 309 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 DgkgQ91WG7 788 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pus10Q9D3U0 527 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ms4a4aA0A087WRT7 236 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Igkv5-43A0A0B4J1J2 115 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Fam181aJ3QNB7 292 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Sod3O09164 251 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pole2O54956 527 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gstm1P10649 218 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ifngr1P15261 477 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Idh2P54071 452 aaKnown RBP11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Pfdn6Q03958 127 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Jmjd8Q3TA59 316 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Naa11Q3UX61 218 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Foxb2Q64733 428 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Tusc1Q673H1 205 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Kif18bQ6PFD6 834 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Paqr3Q6TCG8 311 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Dsg4Q7TMD7 1041 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 B3galnt2Q8BG28 504 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Chst8Q8BQ86 417 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Gk5Q8BX05 534 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Nuak2Q8BZN4 639 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 MfrpQ8K480 584 aa11.32□□□□□ -0.6
Col9a1-202ENSMUST00000088349 Ptov1Q91VU8 416 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 35.3 ms