RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Apex2Q68G58 516 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Lix1Q6P566 282 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ckmt2Q6P8J7 419 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Dcaf13Q6PAC3 445 aaKnown RBP18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 ScaiQ8C8N2 606 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ago1Q8CJG1 857 aaKnown RBP18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 TbccQ8VCN9 341 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Oas1hQ8VI97 369 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Itgb3bpQ9CQ82 176 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tchhl1Q9D3P1 638 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pus10Q9D3U0 527 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 PgcQ9D7R7 392 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ptges3lQ9D9A7 131 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 FancgQ9EQR6 623 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nectin3Q9JLB9 549 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pin1Q9QUR7 165 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Slc2a5Q9WV38 501 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm37596A0A0A6YXL2 336 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Olfr1006A2ALD2 312 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rhox3cA2AWM0 215 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gbp11A9YVJ5 442 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Zfp788E9Q980 884 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nccrp1G3X9C2 266 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rhox3hL7MU37 215 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 MbP04247 154 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Hoxc11P31313 304 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nr5a2P45448 560 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rhox3aQ4TU90 215 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Clec12aQ504P2 267 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Prss53Q571E5 552 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Hist2h2acQ64523 129 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Klhl5Q6PFE1 708 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cnih3Q6ZWS4 160 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rmnd5aQ80YQ8 391 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Klhl26Q8BGY4 606 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Scn3bQ8BHK2 215 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm6377Q8BHV4 303 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nuak2Q8BZN4 639 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Phtf2Q8CB19 747 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nrip1Q8CBD1 1161 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Slc38a4Q8R1S9 547 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cadm1Q8R5M8 456 aaKnown RBP18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Abhd4Q8VD66 342 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Lmcd1Q8VEE1 365 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Olfr1494Q8VGP8 315 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Uts2rQ8VIH9 385 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Man2c1Q91W89 1039 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ska1Q9CPV1 254 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Det1Q9D0A0 550 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Nmnat1Q9EPA7 285 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 IkbkeQ9R0T8 717 aa18.64■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 4933424G06RikA0A140LIP3 267 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Faap100A2ACJ2 879 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pramef25A2ASI9 494 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Zfp964B2RR88 472 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm5483B2RV77 97 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pnldc1B2RXZ1 531 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm4871D3Z0W7 314 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ptch2O35595 1182 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Il1aP01582 270 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Kcnj12P52187 427 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tapt1Q4VBD2 564 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Clec4a4Q5YIR8 236 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ppp1r26Q6A025 1163 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Vac14Q80WQ2 782 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Fam205cQ80YD3 371 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cyth4Q80YW0 393 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Fam78aQ8C552 283 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Taf10Q8K0H5 218 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gprc6aQ8K4Z6 928 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Olfr447Q8VGP6 310 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rbm47Q91WT8 590 aaKnown RBP18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Slc8b1Q925Q3 585 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ndufv2Q9D6J6 248 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tex22Q9D9U4 189 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Smad9Q9JIW5 430 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Stau1Q9Z108 487 aaKnown RBP18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Cldn8Q9Z260 225 aa18.63■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm2237E9Q501 211 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gm3591K7N6X2 186 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Gon7P0C8B4 98 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 CntfP51642 198 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 E2f2P56931 443 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pitx1P70314 315 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Krt80Q0VBK2 452 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Samd12Q0VE29 161 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Tmem181aQ3U3W2 474 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Spata6Q3U6K5 488 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Srek1ip1Q4V9W2 153 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Chst2Q80WV3 530 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Olfr606Q8VGZ8 319 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Fars2Q99M01 451 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Trim16Q99PP9 556 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Ranbp3Q9CT10 491 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pbdc1Q9D0B6 198 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Q9D454 513 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Rhox2aQ9D4Y3 191 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Efhd2Q9D8Y0 240 aaKnown RBP18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Xylt2Q9EPL0 865 aa18.62■□□□□ 0.57
Ccdc50-201ENSMUST00000039443 Pkp3Q9QY23 797 aa18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms