RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	TY1A-PL	P0CX73	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-JR1	P0CX74	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-LR3	P0CX75	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-ML2	P0CX76	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	HBS1	P32769	611 aa	Known RBP	5.52	□□□□□ -1.53
CMR3	YPR013C	TFA2	P36145	328 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	NEM1	P38757	446 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	SLS1	P42900	643 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	LSB6	P42951	607 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	HNT2	P49775	206 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	RKM2	Q03942	479 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	THI73	Q07904	523 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	SOG2	Q08817	791 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-GR1	Q12085	440 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.52	□□□□□ -1.53
CMR3	YPR013C	MDM12	Q92328	271 aa		5.52	□□□□□ -1.53
CMR3	YPR013C	TY1A-OL	Q92392	440 aa	Known RBP	5.52	□□□□□ -1.53
CMR3	YPR013C	ARL1	P38116	183 aa	Known RBP	5.51	□□□□□ -1.53
CMR3	YPR013C	UME1	Q03010	460 aa		5.51	□□□□□ -1.53
CMR3	YPR013C	MTC5	Q03897	1148 aa		5.51	□□□□□ -1.53
CMR3	YPR013C	CDC19	P00549	500 aa	Known RBP	5.5	□□□□□ -1.53
CMR3	YPR013C	KAR1	P11927	433 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	TOP3	P13099	656 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	GSY1	P23337	708 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	DOM34	P33309	386 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	OSH7	P38755	437 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	PAN5	P38787	379 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	DSS1	P39112	969 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	MPH1	P40562	993 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	ALO1	P54783	526 aa	Known RBP	5.5	□□□□□ -1.53
CMR3	YPR013C	NAM8	Q00539	523 aa	Known RBP	5.5	□□□□□ -1.53
CMR3	YPR013C	UBP2	Q01476	1272 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	YIG1	Q08956	461 aa		5.5	□□□□□ -1.53
CMR3	YPR013C	TMA7	Q3E764	64 aa	Known RBP	5.5	□□□□□ -1.53
CMR3	YPR013C	MEF1	P25039	761 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	PWP2	P25635	923 aa	Known RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	AAR2	P32357	355 aa	Predicted RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	YBR284W	P38150	797 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	RGD1	P38339	666 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	NEO1	P40527	1151 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	UBP6	P43593	499 aa	Known RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	GUP1	P53154	560 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	SDA1	P53313	767 aa	Known RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	CEF1	Q03654	590 aa	Predicted RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	YDR306C	Q06640	478 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	FAP7	Q12055	197 aa	Predicted RBP	5.49	□□□□□ -1.53
CMR3	YPR013C	SLX4	Q12098	748 aa		5.49	□□□□□ -1.53
CMR3	YPR013C	RAD53	P22216	821 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	MLS1	P30952	554 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	AFG2	P32794	780 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	VPS24	P36095	224 aa	Known RBP	5.48	□□□□□ -1.53
CMR3	YPR013C	SIP5	P40210	489 aa	Known RBP	5.48	□□□□□ -1.53
CMR3	YPR013C	NIT1	P40447	199 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	YJR120W	P47157	116 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	HAS1	Q03532	505 aa	Known RBP	5.48	□□□□□ -1.53
CMR3	YPR013C	VMS1	Q04311	632 aa	Known RBP	5.48	□□□□□ -1.53
CMR3	YPR013C	YLR001C	Q07895	862 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	GNT1	Q12096	491 aa		5.48	□□□□□ -1.53
CMR3	YPR013C	ALG3	P38179	458 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	MSC7	P38694	644 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	LEM3	P42838	414 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.47	□□□□□ -1.53	not detected
CMR3	YPR013C	GPG1	P53130	126 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	YNR063W	P53749	607 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	SPP382	Q06411	708 aa	Predicted RBP	5.47	□□□□□ -1.53
CMR3	YPR013C	YOR378W	Q08902	515 aa		5.47	□□□□□ -1.53
CMR3	YPR013C	MRP10	O75012	95 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	MSD1	P15179	658 aa	Known RBP	5.46	□□□□□ -1.54
CMR3	YPR013C	VBA3	P25594	458 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	PET10	P36139	283 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	PRK1	P40494	810 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	DAS1	P47005	663 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	MEC3	Q02574	474 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	SPO71	Q03868	1245 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	ECM16	Q04217	1267 aa	Known RBP	5.46	□□□□□ -1.54
CMR3	YPR013C	HFD1	Q04458	532 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	LAP2	Q10740	671 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	YPR071W	Q12346	211 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	PTC5	Q12511	572 aa		5.46	□□□□□ -1.54
CMR3	YPR013C	ATP4	P05626	244 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	DPB3	P27344	201 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	TYS1	P36421	394 aa	Known RBP	5.45	□□□□□ -1.54
CMR3	YPR013C	BAP2	P38084	609 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	SIT1	P39980	628 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	MGS1	P40151	587 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	SEC26	P41810	973 aa	Known RBP	5.45	□□□□□ -1.54
CMR3	YPR013C	ALG2	P43636	503 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	JJJ3	P47138	172 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	GCV1	P48015	400 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	SND1	Q04007	877 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	DUS3	Q06053	668 aa	Known RBP	5.45	□□□□□ -1.54
CMR3	YPR013C	NYV1	Q12255	253 aa		5.45	□□□□□ -1.54
CMR3	YPR013C	ADE8	P04161	214 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.44	□□□□□ -1.54	not detected
CMR3	YPR013C	DIT1	P21623	536 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	FPS1	P23900	669 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	PPH3	P32345	308 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	EUG1	P32474	517 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	YBR071W	P38243	211 aa		5.44	□□□□□ -1.54
CMR3	YPR013C	REI1	P38344	393 aa	Predicted RBP	5.44	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms