RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	RIP-Chip
CDC33	YOL139C	HEM3	P28789	327 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	MKK2	P32491	506 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	ETP1	P38748	585 aa	Known RBP	4.13	□□□□□ -1.75
CDC33	YOL139C	HXT13	P39924	564 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	POL32	P47110	350 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	HXT17	P53631	564 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	HXT15	P54854	567 aa		4.13	□□□□□ -1.75
CDC33	YOL139C	RRP15	Q06511	250 aa	Predicted RBP	4.13	□□□□□ -1.75
CDC33	YOL139C	FLR1	P38124	548 aa		4.12	□□□□□ -1.75
CDC33	YOL139C	AIM3	P38266	947 aa	Known RBP	4.12	□□□□□ -1.75
CDC33	YOL139C	NMD3	P38861	518 aa	Known RBP	4.12	□□□□□ -1.75
CDC33	YOL139C	CNN1	P43618	361 aa		4.12	□□□□□ -1.75
CDC33	YOL139C	YDR132C	Q03900	495 aa		4.12	□□□□□ -1.75
CDC33	YOL139C	SPO21	Q12411	609 aa		4.12	□□□□□ -1.75
CDC33	YOL139C	RPS13	P05756	151 aa	Known RBP	4.11	□□□□□ -1.75
CDC33	YOL139C	DBP5	P20449	482 aa	Known RBP	4.11	□□□□□ -1.75
CDC33	YOL139C	SYP1	P25623	870 aa	Known RBP	4.11	□□□□□ -1.75
CDC33	YOL139C	ROD1	Q02805	837 aa		4.11	□□□□□ -1.75
CDC33	YOL139C	ATG13	Q06628	738 aa		4.11	□□□□□ -1.75
CDC33	YOL139C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
CDC33	YOL139C	DOM34	P33309	386 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	RPS26A	P39938	119 aa	Known RBP	4.1	□□□□□ -1.75
CDC33	YOL139C	RPS26B	P39939	119 aa	Known RBP	4.1	□□□□□ -1.75
CDC33	YOL139C	RAT1	Q02792	1006 aa	Known RBP	4.1	□□□□□ -1.75
CDC33	YOL139C	YML020W	Q03722	664 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	SIZ1	Q04195	904 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	SGD1	Q06132	899 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	RCL1	Q08096	367 aa	Predicted RBP	4.1	□□□□□ -1.75
CDC33	YOL139C	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	YPL277C	Q08989	487 aa		4.1	□□□□□ -1.75
CDC33	YOL139C	YLR358C	O13565	187 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	DED1	P06634	604 aa	Known RBP	4.09	□□□□□ -1.75
CDC33	YOL139C	GPB2	P39717	880 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	MPH1	P40562	993 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	GSF2	Q04697	403 aa	Known RBP	4.09	□□□□□ -1.75
CDC33	YOL139C	MRL1	Q06815	381 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	YOR352W	Q08816	343 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	RTT10	Q08924	1013 aa		4.09	□□□□□ -1.75
CDC33	YOL139C	TMA46	Q12000	345 aa	Known RBP	4.09	□□□□□ -1.75
CDC33	YOL139C	ATE1	P16639	503 aa		4.08	□□□□□ -1.76
CDC33	YOL139C	RAD27	P26793	382 aa		4.08	□□□□□ -1.76
CDC33	YOL139C	LAM1	P38851	1228 aa		4.08	□□□□□ -1.76
CDC33	YOL139C	GCN5	Q03330	439 aa		4.08	□□□□□ -1.76
CDC33	YOL139C	CLU1	Q03690	1277 aa	Known RBP	4.08	□□□□□ -1.76
CDC33	YOL139C	GNT1	Q12096	491 aa		4.08	□□□□□ -1.76
CDC33	YOL139C	THS1	P04801	734 aa	Known RBP	4.07	□□□□□ -1.76
CDC33	YOL139C	GCR1	P07261	785 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	TOD6	P34219	525 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	RFC5	P38251	354 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	MEF2	P39677	819 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	RRT14	P40470	206 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	RSM24	Q03976	319 aa		4.07	□□□□□ -1.76
CDC33	YOL139C	URN1	Q06525	465 aa	Known RBP	4.07	□□□□□ -1.76
CDC33	YOL139C	KIN2	P13186	1147 aa	Known RBP	4.06	□□□□□ -1.76
CDC33	YOL139C	FYV10	P40492	516 aa		4.06	□□□□□ -1.76
CDC33	YOL139C	PBP1	P53297	722 aa	Known RBP	4.06	□□□□□ -1.76
CDC33	YOL139C	CYC1	P00044	109 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC33	YOL139C	YER152C	P10356	443 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	STE11	P23561	717 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	MLS1	P30952	554 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	MNR2	P35724	969 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	ABZ1	P37254	787 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC33	YOL139C	MET10	P39692	1035 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	GEM1	P39722	662 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	SNF7	P39929	240 aa	Known RBP	4.05	□□□□□ -1.76
CDC33	YOL139C	DUS4	Q06063	367 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	ACM1	Q08981	209 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	TAD3	Q9URQ3	322 aa		4.05	□□□□□ -1.76
CDC33	YOL139C	RPP2A	P05319	106 aa	Known RBP	4.04	□□□□□ -1.76
CDC33	YOL139C	NAP1	P25293	417 aa	Known RBP	4.04	□□□□□ -1.76
CDC33	YOL139C	MCM2	P29469	868 aa		4.04	□□□□□ -1.76
CDC33	YOL139C	RER2	P35196	286 aa		4.04	□□□□□ -1.76
CDC33	YOL139C	TAT2	P38967	592 aa		4.04	□□□□□ -1.76
CDC33	YOL139C	TIF35	Q04067	274 aa	Known RBP	4.04	□□□□□ -1.76
CDC33	YOL139C	SPR28	Q04921	423 aa		4.04	□□□□□ -1.76
CDC33	YOL139C	SVS1	Q12254	260 aa		4.04	□□□□□ -1.76
CDC33	YOL139C	RIB2	Q12362	591 aa	Known RBP	4.04	□□□□□ -1.76
CDC33	YOL139C	BAS1	P22035	811 aa		4.03	□□□□□ -1.76
CDC33	YOL139C	CTS1	P29029	562 aa		4.03	□□□□□ -1.76
CDC33	YOL139C	LYP1	P32487	611 aa		4.03	□□□□□ -1.76
CDC33	YOL139C	SPT20	P50875	604 aa		4.03	□□□□□ -1.76
CDC33	YOL139C	RXT3	Q07458	294 aa		4.03	□□□□□ -1.76
CDC33	YOL139C	CDC34	P14682	295 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	ACE2	P21192	770 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	DUT1	P33317	147 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	PNT1	P38969	423 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	KRI1	P42846	591 aa	Known RBP	4.02	□□□□□ -1.77
CDC33	YOL139C	MSC2	Q03455	724 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	YLL058W	Q12198	575 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	RKM4	Q12504	494 aa		4.02	□□□□□ -1.77
CDC33	YOL139C	GAL10	P04397	699 aa		4.01	□□□□□ -1.77
CDC33	YOL139C	RPL11A	P0C0W9	174 aa	Known RBP	4.01	□□□□□ -1.77
CDC33	YOL139C	SLA2	P33338	968 aa		4.01	□□□□□ -1.77
CDC33	YOL139C	PET112	P33893	541 aa		4.01	□□□□□ -1.77
CDC33	YOL139C	ACK1	Q07622	623 aa	Predicted RBP	4.01	□□□□□ -1.77
CDC33	YOL139C	RPL11B	Q3E757	174 aa	Predicted RBP	4.01	□□□□□ -1.77
CDC33	YOL139C	TRP2	P00899	507 aa	Known RBP	4	□□□□□ -1.77
CDC33	YOL139C	CDC6	P09119	513 aa		4	□□□□□ -1.77
CDC33	YOL139C	CMP2	P14747	604 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms