RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	APP1	P53933	587 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	COG6	P53959	839 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	ERO1	Q03103	563 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	CWC21	Q03375	135 aa	Known RBP	3.6	□□□□□ -1.83
SQS1	YNL224C	SAS4	Q04003	481 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	YMR018W	Q04364	514 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	FUS2	Q05670	677 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	PPM2	Q08282	695 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	YGR161W-C	Q3E744	92 aa		3.6	□□□□□ -1.83
SQS1	YNL224C	SPS1	P08458	490 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	MSH2	P25847	964 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	HSP104	P31539	908 aa	Known RBP	3.59	□□□□□ -1.83
SQS1	YNL224C	SLA2	P33338	968 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	WHI3	P34761	661 aa	Known RBP	3.59	□□□□□ -1.83
SQS1	YNL224C	SAP185	P40856	1058 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	SNZ3	P43545	298 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	CNN1	P43618	361 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	GCD14	P46959	383 aa	Predicted RBP	3.59	□□□□□ -1.83
SQS1	YNL224C	YJR120W	P47157	116 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	SDA1	P53313	767 aa	Known RBP	3.59	□□□□□ -1.83
SQS1	YNL224C	SNZ2	P53824	298 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	NEW1	Q08972	1196 aa	Known RBP	3.59	□□□□□ -1.83
SQS1	YNL224C	REC8	Q12188	680 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	FRT1	Q99332	602 aa		3.59	□□□□□ -1.83
SQS1	YNL224C	TEF1	P02994	458 aa	Known RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	ATP4	P05626	244 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.84	RIP-Chip
SQS1	YNL224C	STE3	P06783	470 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	TIF1	P10081	395 aa	Known RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	CKA2	P19454	339 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	SFL1	P20134	766 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	VAN1	P23642	535 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	MIH1	P23748	554 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	DPB3	P27344	201 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	LYP1	P32487	611 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	TFC4	P33339	1025 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	NUP120	P35729	1037 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	MIC60	P36112	540 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	KIC1	P38692	1080 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	SET1	P38827	1080 aa	Known RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	MNT3	P40549	630 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	RLP7	P40693	322 aa	Known RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	YJR107W	P47145	328 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	UBA2	P52488	636 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	SAP4	P53036	818 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	CAF130	P53280	1122 aa	Predicted RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	LSB1	P53281	241 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	HST1	P53685	503 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	ADE13	Q05911	482 aa	Known RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	DNL4	Q08387	944 aa	Predicted RBP	3.59	□□□□□ -1.84
SQS1	YNL224C	BUG1	Q12191	341 aa		3.59	□□□□□ -1.84
SQS1	YNL224C	SPO16	P17122	198 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	PUP1	P25043	261 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	VMA8	P32610	256 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	CSE1	P33307	960 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	VPS35	P34110	944 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	BAP2	P38084	609 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	ALG14	P38242	237 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	REI1	P38344	393 aa	Predicted RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	YHR020W	P38708	688 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	OSH3	P38713	996 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	KAP123	P40069	1113 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	TOK1	P40310	691 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	HUL4	P40985	892 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	MMM1	P41800	426 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YFL066C	P43538	392 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	POL32	P47110	350 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	MIG2	P53035	382 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	NCS2	P53923	493 aa	Predicted RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	RPL34A	P87262	121 aa	Predicted RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	NSE5	Q03718	556 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	ECM11	Q04110	302 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	PIB1	Q06651	286 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	MSC6	Q08818	692 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SQS1	YNL224C	YRF1-4	O13559	1382 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YML133C	Q03099	1374 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YLL067C	Q07888	1374 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YLL066C	Q99208	1374 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	CLB3	P24870	427 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	MRC1	P25588	1096 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	CDC48	P25694	835 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	OXP1	P28273	1286 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	HIR1	P32479	840 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	PET112	P33893	541 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YKL100C	P34248	587 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SQS1	YNL224C	YKL023W	P36103	277 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	YSW1	P38280	609 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	EDC3	P39998	551 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	ALD5	P40047	520 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	NDC80	P40460	691 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	PKP1	P40530	394 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	GPP1	P41277	250 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	FYV8	P46949	817 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	UBP15	P50101	1230 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	DIP5	P53388	608 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	BUL2	Q03758	920 aa	Known RBP	3.58	□□□□□ -1.84
SQS1	YNL224C	MCP2	Q06567	569 aa		3.58	□□□□□ -1.84
SQS1	YNL224C	YDL124W	Q07551	312 aa	Known RBP	3.58	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms