RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C SPO21Q12411 609 aa5.8□□□□□ -1.48
SUB1YMR039C DBP5P20449 482 aaKnown RBP5.79□□□□□ -1.48
SUB1YMR039C GAS1P22146 559 aaKnown RBP5.79□□□□□ -1.48
SUB1YMR039C RAD27P26793 382 aa5.79□□□□□ -1.48
SUB1YMR039C AIM26P32858 118 aa5.79□□□□□ -1.48
SUB1YMR039C CCZ1P38273 704 aa5.79□□□□□ -1.48
SUB1YMR039C FOL2P51601 243 aaKnown RBP5.79□□□□□ -1.48
SUB1YMR039C ENV11P53246 860 aa5.79□□□□□ -1.48
SUB1YMR039C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SUB1YMR039C TMA46Q12000 345 aaKnown RBP5.79□□□□□ -1.48
SUB1YMR039C SNF5P18480 905 aa5.78□□□□□ -1.48
SUB1YMR039C PIK1P39104 1066 aa5.78□□□□□ -1.48
SUB1YMR039C CDA2Q06703 312 aa5.78□□□□□ -1.48
SUB1YMR039C RCL1Q08096 367 aaPredicted RBP5.78□□□□□ -1.48
SUB1YMR039C YDL177CQ12257 170 aa5.78□□□□□ -1.48
SUB1YMR039C DUT1P33317 147 aa5.77□□□□□ -1.49
SUB1YMR039C RER2P35196 286 aa5.77□□□□□ -1.49
SUB1YMR039C MNR2P35724 969 aa5.77□□□□□ -1.49
SUB1YMR039C UBP5P39944 805 aa5.77□□□□□ -1.49
SUB1YMR039C SPS1P08458 490 aa5.76□□□□□ -1.49
SUB1YMR039C PUF4P25339 888 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
SUB1YMR039C MPH1P40562 993 aa5.76□□□□□ -1.49
SUB1YMR039C CDC34P14682 295 aa5.75□□□□□ -1.49
SUB1YMR039C MLS1P30952 554 aa5.75□□□□□ -1.49
SUB1YMR039C PET112P33893 541 aa5.75□□□□□ -1.49
SUB1YMR039C ETP1P38748 585 aaKnown RBP5.75□□□□□ -1.49
SUB1YMR039C HNT2P49775 206 aa5.75□□□□□ -1.49
SUB1YMR039C MRPL22P53881 309 aa5.75□□□□□ -1.49
SUB1YMR039C YER152CP10356 443 aa5.74□□□□□ -1.49
SUB1YMR039C TIF35Q04067 274 aaKnown RBP5.74□□□□□ -1.49
SUB1YMR039C RSB1Q08417 382 aa5.74□□□□□ -1.49
SUB1YMR039C MET10P39692 1035 aa5.73□□□□□ -1.49
SUB1YMR039C SEC26P41810 973 aaKnown RBP5.73□□□□□ -1.49
SUB1YMR039C SNO2P53823 222 aa5.73□□□□□ -1.49
SUB1YMR039C GNT1Q12096 491 aa5.73□□□□□ -1.49
SUB1YMR039C PRP6P19735 899 aaPredicted RBP5.72□□□□□ -1.49
SUB1YMR039C LYP1P32487 611 aa5.72□□□□□ -1.49
SUB1YMR039C EEB1Q02891 456 aa5.72□□□□□ -1.49
SUB1YMR039C TRP2P00899 507 aaKnown RBP5.71□□□□□ -1.5
SUB1YMR039C NAP1P25293 417 aaKnown RBP5.7□□□□□ -1.5
SUB1YMR039C THI80P35202 319 aa5.7□□□□□ -1.5
SUB1YMR039C MCM7P38132 845 aa5.7□□□□□ -1.5
SUB1YMR039C YFL054CP43549 646 aa5.7□□□□□ -1.5
SUB1YMR039C RIM8P53179 542 aa5.7□□□□□ -1.5
SUB1YMR039C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SUB1YMR039C SVF1Q05515 481 aa5.7□□□□□ -1.5
SUB1YMR039C ABZ1P37254 787 aaPredicted RBP5.69□□□□□ -1.5
SUB1YMR039C AIM3P38266 947 aaKnown RBP5.69□□□□□ -1.5
SUB1YMR039C TYW3P53177 273 aa5.69□□□□□ -1.5
SUB1YMR039C BAS1P22035 811 aa5.68□□□□□ -1.5
SUB1YMR039C ATG13Q06628 738 aa5.68□□□□□ -1.5
SUB1YMR039C SOD2P00447 233 aa5.67□□□□□ -1.5
SUB1YMR039C RPL11AP0C0W9 174 aaKnown RBP5.67□□□□□ -1.5
SUB1YMR039C YGR053CP53234 283 aa5.67□□□□□ -1.5
SUB1YMR039C ACM1Q08981 209 aa5.67□□□□□ -1.5
SUB1YMR039C RKM4Q12504 494 aa5.67□□□□□ -1.5
SUB1YMR039C RPL11BQ3E757 174 aaPredicted RBP5.67□□□□□ -1.5
SUB1YMR039C RPS13P05756 151 aaKnown RBP5.66□□□□□ -1.5
SUB1YMR039C CLN2P20438 545 aa5.66□□□□□ -1.5
SUB1YMR039C RFC5P38251 354 aa5.66□□□□□ -1.5
SUB1YMR039C PNT1P38969 423 aa5.66□□□□□ -1.5
SUB1YMR039C RSM24Q03976 319 aa5.66□□□□□ -1.5
SUB1YMR039C SGD1Q06132 899 aa5.66□□□□□ -1.5
SUB1YMR039C YPL277CQ08989 487 aa5.66□□□□□ -1.5
SUB1YMR039C CYC1P00044 109 aaPredicted RBP5.65□□□□□ -1.5
SUB1YMR039C INO1P11986 533 aa5.65□□□□□ -1.5
SUB1YMR039C GEM1P39722 662 aa5.65□□□□□ -1.5
SUB1YMR039C MXR1P40029 184 aa5.65□□□□□ -1.5
SUB1YMR039C SPO20Q04359 397 aa5.65□□□□□ -1.5
SUB1YMR039C SPP382Q06411 708 aaPredicted RBP5.65□□□□□ -1.5
SUB1YMR039C PIN2Q12057 282 aa5.65□□□□□ -1.5
SUB1YMR039C YPL066WQ12194 479 aa5.65□□□□□ -1.5
SUB1YMR039C SVS1Q12254 260 aa5.65□□□□□ -1.5
SUB1YMR039C DBP2P24783 546 aaKnown RBP5.64□□□□□ -1.51
SUB1YMR039C SLA2P33338 968 aa5.64□□□□□ -1.51
SUB1YMR039C MOT2P34909 587 aaKnown RBP5.64□□□□□ -1.51
SUB1YMR039C UGA2P38067 497 aa5.64□□□□□ -1.51
SUB1YMR039C LAM1P38851 1228 aa5.64□□□□□ -1.51
SUB1YMR039C FAA4P47912 694 aaKnown RBP5.64□□□□□ -1.51
SUB1YMR039C VPS16Q03308 798 aa5.64□□□□□ -1.51
SUB1YMR039C YDR132CQ03900 495 aa5.64□□□□□ -1.51
SUB1YMR039C ESC8Q08119 714 aa5.64□□□□□ -1.51
SUB1YMR039C YOR352WQ08816 343 aa5.64□□□□□ -1.51
SUB1YMR039C THS1P04801 734 aaKnown RBP5.63□□□□□ -1.51
SUB1YMR039C KIN2P13186 1147 aaKnown RBP5.63□□□□□ -1.51
SUB1YMR039C ACE2P21192 770 aa5.63□□□□□ -1.51
SUB1YMR039C YKL107WP34251 309 aa5.63□□□□□ -1.51
SUB1YMR039C SNF7P39929 240 aaKnown RBP5.63□□□□□ -1.51
SUB1YMR039C RRT14P40470 206 aa5.63□□□□□ -1.51
SUB1YMR039C SNU71P53207 620 aaKnown RBP5.63□□□□□ -1.51
SUB1YMR039C RIB2Q12362 591 aaKnown RBP5.63□□□□□ -1.51
SUB1YMR039C MEF2P39677 819 aa5.62□□□□□ -1.51
SUB1YMR039C MAD1P40957 749 aa5.62□□□□□ -1.51
SUB1YMR039C KRI1P42846 591 aaKnown RBP5.62□□□□□ -1.51
SUB1YMR039C YGL176CP46945 554 aa5.62□□□□□ -1.51
SUB1YMR039C GDE1Q02979 1223 aa5.62□□□□□ -1.51
SUB1YMR039C SIZ1Q04195 904 aa5.62□□□□□ -1.51
SUB1YMR039C YLR225CQ05948 407 aaKnown RBP5.62□□□□□ -1.51
SUB1YMR039C BI4P03879 638 aa5.61□□□□□ -1.51
SUB1YMR039C SRM1P21827 482 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms