RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W AOS1Q06624 347 aa5.38□□□□□ -1.55
VPS38YLR360W PIN2Q12057 282 aa5.38□□□□□ -1.55
VPS38YLR360W TRP2P00899 507 aaKnown RBP5.37□□□□□ -1.55
VPS38YLR360W SAM35P14693 329 aa5.37□□□□□ -1.55
VPS38YLR360W LYP1P32487 611 aa5.37□□□□□ -1.55
VPS38YLR360W MOT2P34909 587 aaKnown RBP5.37□□□□□ -1.55
VPS38YLR360W VAC8P39968 578 aa5.37□□□□□ -1.55
VPS38YLR360W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
VPS38YLR360W EEB1Q02891 456 aa5.37□□□□□ -1.55
VPS38YLR360W HOS3Q02959 697 aaKnown RBP5.37□□□□□ -1.55
VPS38YLR360W MDL2P33311 773 aa5.36□□□□□ -1.55
VPS38YLR360W SEA4P38164 1038 aa5.36□□□□□ -1.55
VPS38YLR360W COQ4O13525 335 aa5.35□□□□□ -1.55
VPS38YLR360W YER152CP10356 443 aa5.35□□□□□ -1.55
VPS38YLR360W PUF4P25339 888 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
VPS38YLR360W AIM26P32858 118 aa5.35□□□□□ -1.55
VPS38YLR360W HNT2P49775 206 aa5.35□□□□□ -1.55
VPS38YLR360W YGR053CP53234 283 aa5.35□□□□□ -1.55
VPS38YLR360W TNA1P53322 534 aa5.35□□□□□ -1.55
VPS38YLR360W ALD6P54115 500 aaKnown RBP5.35□□□□□ -1.55
VPS38YLR360W SPO20Q04359 397 aa5.35□□□□□ -1.55
VPS38YLR360W NBA1Q08229 501 aaKnown RBP5.35□□□□□ -1.55
VPS38YLR360W INO1P11986 533 aa5.34□□□□□ -1.55
VPS38YLR360W BAS1P22035 811 aa5.34□□□□□ -1.55
VPS38YLR360W SRO9P25567 434 aaKnown RBP5.34□□□□□ -1.55
VPS38YLR360W HSP78P33416 811 aa5.34□□□□□ -1.55
VPS38YLR360W POL12P38121 705 aaPredicted RBP5.34□□□□□ -1.55
VPS38YLR360W MPH1P40562 993 aa5.34□□□□□ -1.55
VPS38YLR360W YLR225CQ05948 407 aaKnown RBP5.34□□□□□ -1.55
VPS38YLR360W RCL1Q08096 367 aaPredicted RBP5.34□□□□□ -1.55
VPS38YLR360W RSB1Q08417 382 aa5.34□□□□□ -1.55
VPS38YLR360W FAL1Q12099 399 aaKnown RBP5.34□□□□□ -1.55
VPS38YLR360W PRI2P20457 528 aa5.33□□□□□ -1.56
VPS38YLR360W CCZ1P38273 704 aa5.33□□□□□ -1.56
VPS38YLR360W RPN3P40016 523 aaKnown RBP5.33□□□□□ -1.56
VPS38YLR360W RSC58Q07979 502 aa5.33□□□□□ -1.56
VPS38YLR360W YGL176CP46945 554 aa5.32□□□□□ -1.56
VPS38YLR360W FOL2P51601 243 aaKnown RBP5.32□□□□□ -1.56
VPS38YLR360W ABD1P32783 436 aaPredicted RBP5.31□□□□□ -1.56
VPS38YLR360W YKL107WP34251 309 aa5.31□□□□□ -1.56
VPS38YLR360W YFL054CP43549 646 aa5.31□□□□□ -1.56
VPS38YLR360W ESC2Q06340 456 aa5.31□□□□□ -1.56
VPS38YLR360W SPP382Q06411 708 aaPredicted RBP5.31□□□□□ -1.56
VPS38YLR360W GNT1Q12096 491 aa5.31□□□□□ -1.56
VPS38YLR360W LPX1Q12405 387 aaKnown RBP5.31□□□□□ -1.56
VPS38YLR360W RKM4Q12504 494 aa5.31□□□□□ -1.56
VPS38YLR360W SPS1P08458 490 aa5.3□□□□□ -1.56
VPS38YLR360W BAP2P38084 609 aa5.3□□□□□ -1.56
VPS38YLR360W OPI10Q08202 246 aa5.3□□□□□ -1.56
VPS38YLR360W SNF5P18480 905 aa5.29□□□□□ -1.56
VPS38YLR360W LRG1P35688 1017 aa5.29□□□□□ -1.56
VPS38YLR360W PIK1P39104 1066 aa5.29□□□□□ -1.56
VPS38YLR360W MXR1P40029 184 aa5.29□□□□□ -1.56
VPS38YLR360W KRI1P42846 591 aaKnown RBP5.29□□□□□ -1.56
VPS38YLR360W YPL066WQ12194 479 aa5.29□□□□□ -1.56
VPS38YLR360W DFG16Q99234 619 aa5.29□□□□□ -1.56
VPS38YLR360W RPL11AP0C0W9 174 aaKnown RBP5.28□□□□□ -1.56
VPS38YLR360W ORC3P54790 616 aa5.28□□□□□ -1.56
VPS38YLR360W WRS1Q12109 432 aaKnown RBP5.28□□□□□ -1.56
VPS38YLR360W RPL11BQ3E757 174 aaPredicted RBP5.28□□□□□ -1.56
VPS38YLR360W PIN4P34217 668 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
VPS38YLR360W SNF7P39929 240 aaKnown RBP5.27□□□□□ -1.57
VPS38YLR360W DBP2P24783 546 aaKnown RBP5.26□□□□□ -1.57
VPS38YLR360W SEG2P34250 1132 aa5.26□□□□□ -1.57
VPS38YLR360W YKL069WP36088 180 aa5.26□□□□□ -1.57
VPS38YLR360W ETP1P38748 585 aaKnown RBP5.26□□□□□ -1.57
VPS38YLR360W AVT1P47082 602 aa5.26□□□□□ -1.57
VPS38YLR360W ECL1P48235 211 aa5.26□□□□□ -1.57
VPS38YLR360W AGP1P25376 633 aa5.25□□□□□ -1.57
VPS38YLR360W UGA2P38067 497 aa5.25□□□□□ -1.57
VPS38YLR360W PNT1P38969 423 aa5.25□□□□□ -1.57
VPS38YLR360W ACM1Q08981 209 aa5.25□□□□□ -1.57
VPS38YLR360W SBA1P28707 216 aaKnown RBP5.24□□□□□ -1.57
VPS38YLR360W VBA5P36172 582 aa5.24□□□□□ -1.57
VPS38YLR360W MBP1P39678 833 aa5.24□□□□□ -1.57
VPS38YLR360W GEM1P39722 662 aa5.24□□□□□ -1.57
VPS38YLR360W SIP5P40210 489 aaKnown RBP5.24□□□□□ -1.57
VPS38YLR360W SEC26P41810 973 aaKnown RBP5.24□□□□□ -1.57
VPS38YLR360W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
VPS38YLR360W TDA5Q06417 326 aaKnown RBP5.24□□□□□ -1.57
VPS38YLR360W SVS1Q12254 260 aa5.24□□□□□ -1.57
VPS38YLR360W RFC5P38251 354 aa5.23□□□□□ -1.57
VPS38YLR360W IRC24P40580 263 aa5.23□□□□□ -1.57
VPS38YLR360W GAS1P22146 559 aaKnown RBP5.23□□□□□ -1.57
VPS38YLR360W YOR352WQ08816 343 aa5.23□□□□□ -1.57
VPS38YLR360W BI4P03879 638 aa5.22□□□□□ -1.57
VPS38YLR360W THS1P04801 734 aaKnown RBP5.22□□□□□ -1.57
VPS38YLR360W SLA2P33338 968 aa5.22□□□□□ -1.57
VPS38YLR360W SPF1P39986 1215 aaKnown RBP5.22□□□□□ -1.57
VPS38YLR360W RSM24Q03976 319 aa5.22□□□□□ -1.57
VPS38YLR360W SHE9Q04172 456 aa5.22□□□□□ -1.57
VPS38YLR360W SSF2Q12153 453 aaPredicted RBP5.22□□□□□ -1.57
VPS38YLR360W YDL177CQ12257 170 aa5.22□□□□□ -1.57
VPS38YLR360W RNQ1P25367 405 aa5.21□□□□□ -1.58
VPS38YLR360W GRX1P25373 110 aaKnown RBP5.21□□□□□ -1.58
VPS38YLR360W APL1P27351 700 aa5.21□□□□□ -1.58
VPS38YLR360W ABZ1P37254 787 aaPredicted RBP5.21□□□□□ -1.58
VPS38YLR360W ENV11P53246 860 aa5.21□□□□□ -1.58
VPS38YLR360W MRPL22P53881 309 aa5.21□□□□□ -1.58
VPS38YLR360W MRP8P35719 219 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms