RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C MET1P36150 593 aa5.13□□□□□ -1.59
CDC42YLR229C NUP133P36161 1157 aa5.13□□□□□ -1.59
CDC42YLR229C YJR008WP47085 338 aa5.13□□□□□ -1.59
CDC42YLR229C YJR107WP47145 328 aa5.13□□□□□ -1.59
CDC42YLR229C RRP15Q06511 250 aaPredicted RBP5.13□□□□□ -1.59
CDC42YLR229C YDR461C-AQ2V2P7 80 aa5.13□□□□□ -1.59
CDC42YLR229C SWI1P09547 1314 aa5.13□□□□□ -1.59
CDC42YLR229C RAD50P12753 1312 aa5.13□□□□□ -1.59
CDC42YLR229C YRF1-3P0CX14 1859 aa5.13□□□□□ -1.59
CDC42YLR229C YRF1-7P0CX15 1859 aa5.13□□□□□ -1.59
CDC42YLR229C YRF1-6P53819 1859 aa5.13□□□□□ -1.59
CDC42YLR229C YER156CP40093 338 aaKnown RBP5.12□□□□□ -1.59
CDC42YLR229C YIR007WP40566 764 aa5.12□□□□□ -1.59
CDC42YLR229C YJL181WP46987 611 aa5.12□□□□□ -1.59
CDC42YLR229C PIL1P53252 339 aaKnown RBP5.12□□□□□ -1.59
CDC42YLR229C VPS64Q03944 604 aa5.12□□□□□ -1.59
CDC42YLR229C YCS4Q06156 1176 aa5.12□□□□□ -1.59
CDC42YLR229C SSP2Q08646 371 aa5.12□□□□□ -1.59
CDC42YLR229C COBP00163 385 aa5.11□□□□□ -1.59
CDC42YLR229C CDC16P09798 840 aa5.11□□□□□ -1.59
CDC42YLR229C GRX1P25373 110 aaKnown RBP5.11□□□□□ -1.59
CDC42YLR229C ACO2P39533 789 aa5.11□□□□□ -1.59
CDC42YLR229C DOT5P40553 215 aa5.11□□□□□ -1.59
CDC42YLR229C DAL4Q04895 635 aa5.11□□□□□ -1.59
CDC42YLR229C ESF1Q06344 628 aaKnown RBP5.11□□□□□ -1.59
CDC42YLR229C FLP1P03870 423 aa5.1□□□□□ -1.59
CDC42YLR229C LPD1P09624 499 aaKnown RBP5.1□□□□□ -1.59
CDC42YLR229C FUS1P11710 512 aa5.1□□□□□ -1.59
CDC42YLR229C IDI1P15496 288 aa5.1□□□□□ -1.59
CDC42YLR229C NAB2P32505 525 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
CDC42YLR229C UBP12P39538 1254 aa5.1□□□□□ -1.59
CDC42YLR229C YNR040WP53736 256 aa5.1□□□□□ -1.59
CDC42YLR229C MDG1P53885 366 aa5.1□□□□□ -1.59
CDC42YLR229C RMD1Q03441 430 aa5.1□□□□□ -1.59
CDC42YLR229C JIP5Q06214 492 aaPredicted RBP5.1□□□□□ -1.59
CDC42YLR229C PRE9P23638 258 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C PYC2P32327 1180 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C PRP40P33203 583 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C SQT1P35184 431 aa5.09□□□□□ -1.59
CDC42YLR229C APL2P36000 726 aaPredicted RBP5.09□□□□□ -1.59
CDC42YLR229C YKR075CP36155 307 aa5.09□□□□□ -1.59
CDC42YLR229C PAM1P37304 830 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C RIX1P38883 763 aaPredicted RBP5.09□□□□□ -1.59
CDC42YLR229C RVS167P39743 482 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C RPS26AP39938 119 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C RPS26BP39939 119 aaKnown RBP5.09□□□□□ -1.59
CDC42YLR229C MAD1P40957 749 aa5.09□□□□□ -1.59
CDC42YLR229C MRPS18P42847 217 aa5.09□□□□□ -1.59
CDC42YLR229C LYS5P50113 272 aa5.09□□□□□ -1.59
CDC42YLR229C MON1P53129 644 aa5.09□□□□□ -1.59
CDC42YLR229C CTR9P89105 1077 aa5.09□□□□□ -1.59
CDC42YLR229C LCD1Q04377 747 aa5.09□□□□□ -1.59
CDC42YLR229C PMT7Q06644 662 aa5.09□□□□□ -1.59
CDC42YLR229C PHM7Q12252 991 aa5.09□□□□□ -1.59
CDC42YLR229C NCB2Q92317 146 aa5.09□□□□□ -1.59
CDC42YLR229C VAS1P07806 1104 aaKnown RBP5.08□□□□□ -1.6
CDC42YLR229C MCM5P29496 775 aaKnown RBP5.08□□□□□ -1.6
CDC42YLR229C BRN1P38170 754 aa5.08□□□□□ -1.6
CDC42YLR229C TCD1P38756 429 aa5.08□□□□□ -1.6
CDC42YLR229C SHU2P38957 223 aa5.08□□□□□ -1.6
CDC42YLR229C RSM26P47141 266 aa5.08□□□□□ -1.6
CDC42YLR229C SPR28Q04921 423 aa5.08□□□□□ -1.6
CDC42YLR229C SYT1Q06836 1226 aa5.08□□□□□ -1.6
CDC42YLR229C MCD1Q12158 566 aa5.08□□□□□ -1.6
CDC42YLR229C SUP35P05453 685 aaKnown RBP5.07□□□□□ -1.6
CDC42YLR229C CLN2P20438 545 aa5.07□□□□□ -1.6
CDC42YLR229C MCM2P29469 868 aa5.07□□□□□ -1.6
CDC42YLR229C ECM21P38167 1117 aaKnown RBP5.07□□□□□ -1.6
CDC42YLR229C TPM2P40414 161 aa5.07□□□□□ -1.6
CDC42YLR229C FYV10P40492 516 aa5.07□□□□□ -1.6
CDC42YLR229C NUT1P53114 1132 aa5.07□□□□□ -1.6
CDC42YLR229C PKH1Q03407 766 aa5.07□□□□□ -1.6
CDC42YLR229C PDR18P53756 1333 aa5.06□□□□□ -1.6
CDC42YLR229C CCP1P00431 361 aa5.06□□□□□ -1.6
CDC42YLR229C PET112P33893 541 aa5.06□□□□□ -1.6
CDC42YLR229C ATG14P38270 344 aa5.06□□□□□ -1.6
CDC42YLR229C HXT13P39924 564 aa5.06□□□□□ -1.6
CDC42YLR229C RSM25P40496 264 aa5.06□□□□□ -1.6
CDC42YLR229C INP51P40559 946 aaKnown RBP5.06□□□□□ -1.6
CDC42YLR229C MLC1P53141 149 aa5.06□□□□□ -1.6
CDC42YLR229C YGL082WP53155 381 aa5.06□□□□□ -1.6
CDC42YLR229C MSH6Q03834 1242 aa5.06□□□□□ -1.6
CDC42YLR229C MTC5Q03897 1148 aa5.06□□□□□ -1.6
CDC42YLR229C TY1A-DR2Q03964 440 aaKnown RBP5.06□□□□□ -1.6
CDC42YLR229C CYC8P14922 966 aa5.05□□□□□ -1.6
CDC42YLR229C SER1P33330 395 aaKnown RBP5.05□□□□□ -1.6
CDC42YLR229C MSC7P38694 644 aa5.05□□□□□ -1.6
CDC42YLR229C FET4P40988 552 aa5.05□□□□□ -1.6
CDC42YLR229C LEM3P42838 414 aa5.05□□□□□ -1.6
CDC42YLR229C YGL242CP53066 181 aa5.05□□□□□ -1.6
CDC42YLR229C YGR035CP53222 116 aa5.05□□□□□ -1.6
CDC42YLR229C HXT17P53631 564 aa5.05□□□□□ -1.6
CDC42YLR229C BRE1Q07457 700 aaKnown RBP5.05□□□□□ -1.6
CDC42YLR229C DPH6Q12429 685 aa5.05□□□□□ -1.6
CDC42YLR229C HXK1P04806 485 aaKnown RBP5.04□□□□□ -1.6
CDC42YLR229C RNR2P09938 399 aaKnown RBP5.04□□□□□ -1.6
CDC42YLR229C KNS1P32350 737 aaPredicted RBP5.04□□□□□ -1.6
CDC42YLR229C MIC60P36112 540 aa5.04□□□□□ -1.6
CDC42YLR229C FAA3P39002 694 aa5.04□□□□□ -1.6
CDC42YLR229C PRK1P40494 810 aa5.04□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms