RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C MDL2P33311 773 aa6.05□□□□□ -1.44
SMD3YLR147C GTS1P40956 396 aa6.05□□□□□ -1.44
SMD3YLR147C FAA4P47912 694 aaKnown RBP6.05□□□□□ -1.44
SMD3YLR147C ORC3P54790 616 aa6.05□□□□□ -1.44
SMD3YLR147C HOS3Q02959 697 aaKnown RBP6.05□□□□□ -1.44
SMD3YLR147C AOS1Q06624 347 aa6.05□□□□□ -1.44
SMD3YLR147C TRP2P00899 507 aaKnown RBP6.04□□□□□ -1.44
SMD3YLR147C YER152CP10356 443 aa6.04□□□□□ -1.44
SMD3YLR147C SNF5P18480 905 aa6.04□□□□□ -1.44
SMD3YLR147C BAP2P38084 609 aa6.04□□□□□ -1.44
SMD3YLR147C RPN3P40016 523 aaKnown RBP6.04□□□□□ -1.44
SMD3YLR147C NAP1P25293 417 aaKnown RBP6.03□□□□□ -1.44
SMD3YLR147C HSP78P33416 811 aa6.03□□□□□ -1.44
SMD3YLR147C MAD1P40957 749 aa6.03□□□□□ -1.44
SMD3YLR147C TYW3P53177 273 aa6.03□□□□□ -1.44
SMD3YLR147C TNA1P53322 534 aa6.03□□□□□ -1.44
SMD3YLR147C CLN2P20438 545 aa6.02□□□□□ -1.45
SMD3YLR147C LRG1P35688 1017 aa6.02□□□□□ -1.45
SMD3YLR147C YFL054CP43549 646 aa6.02□□□□□ -1.45
SMD3YLR147C GDE1Q02979 1223 aa6.02□□□□□ -1.45
SMD3YLR147C RSC58Q07979 502 aa6.02□□□□□ -1.45
SMD3YLR147C PUF4P25339 888 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
SMD3YLR147C HNT2P49775 206 aa6.01□□□□□ -1.45
SMD3YLR147C COQ4O13525 335 aa6□□□□□ -1.45
SMD3YLR147C MOT2P34909 587 aaKnown RBP6□□□□□ -1.45
SMD3YLR147C POL12P38121 705 aaPredicted RBP6□□□□□ -1.45
SMD3YLR147C MCM7P38132 845 aa6□□□□□ -1.45
SMD3YLR147C GNT1Q12096 491 aa6□□□□□ -1.45
SMD3YLR147C YPL066WQ12194 479 aa6□□□□□ -1.45
SMD3YLR147C DFG16Q99234 619 aa6□□□□□ -1.45
SMD3YLR147C INO1P11986 533 aa5.99□□□□□ -1.45
SMD3YLR147C PIK1P39104 1066 aa5.99□□□□□ -1.45
SMD3YLR147C CWC24P53769 259 aa5.99□□□□□ -1.45
SMD3YLR147C YLR225CQ05948 407 aaKnown RBP5.99□□□□□ -1.45
SMD3YLR147C AIM26P32858 118 aa5.98□□□□□ -1.45
SMD3YLR147C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SMD3YLR147C ESC2Q06340 456 aa5.98□□□□□ -1.45
SMD3YLR147C DBP2P24783 546 aaKnown RBP5.97□□□□□ -1.45
SMD3YLR147C ALD6P54115 500 aaKnown RBP5.97□□□□□ -1.45
SMD3YLR147C RKM4Q12504 494 aa5.97□□□□□ -1.45
SMD3YLR147C RPL11AP0C0W9 174 aaKnown RBP5.96□□□□□ -1.46
SMD3YLR147C ABZ1P37254 787 aaPredicted RBP5.96□□□□□ -1.46
SMD3YLR147C CCZ1P38273 704 aa5.96□□□□□ -1.46
SMD3YLR147C PNT1P38969 423 aa5.96□□□□□ -1.46
SMD3YLR147C VAC8P39968 578 aa5.96□□□□□ -1.46
SMD3YLR147C MXR1P40029 184 aa5.96□□□□□ -1.46
SMD3YLR147C ECL1P48235 211 aa5.96□□□□□ -1.46
SMD3YLR147C SPO20Q04359 397 aa5.96□□□□□ -1.46
SMD3YLR147C NBA1Q08229 501 aaKnown RBP5.96□□□□□ -1.46
SMD3YLR147C RPL11BQ3E757 174 aaPredicted RBP5.96□□□□□ -1.46
SMD3YLR147C BAS1P22035 811 aa5.95□□□□□ -1.46
SMD3YLR147C ABD1P32783 436 aaPredicted RBP5.95□□□□□ -1.46
SMD3YLR147C SEG2P34250 1132 aa5.95□□□□□ -1.46
SMD3YLR147C YGL176CP46945 554 aa5.95□□□□□ -1.46
SMD3YLR147C AVT1P47082 602 aa5.95□□□□□ -1.46
SMD3YLR147C OPI10Q08202 246 aa5.95□□□□□ -1.46
SMD3YLR147C YDL177CQ12257 170 aa5.95□□□□□ -1.46
SMD3YLR147C YKL069WP36088 180 aa5.94□□□□□ -1.46
SMD3YLR147C SIP5P40210 489 aaKnown RBP5.94□□□□□ -1.46
SMD3YLR147C FAL1Q12099 399 aaKnown RBP5.94□□□□□ -1.46
SMD3YLR147C SPS1P08458 490 aa5.93□□□□□ -1.46
SMD3YLR147C PRI2P20457 528 aa5.93□□□□□ -1.46
SMD3YLR147C AGP1P25376 633 aa5.93□□□□□ -1.46
SMD3YLR147C YKL107WP34251 309 aa5.93□□□□□ -1.46
SMD3YLR147C SPP382Q06411 708 aaPredicted RBP5.93□□□□□ -1.46
SMD3YLR147C RSB1Q08417 382 aa5.93□□□□□ -1.46
SMD3YLR147C SLA2P33338 968 aa5.92□□□□□ -1.46
SMD3YLR147C TSA1P34760 196 aaKnown RBP5.92□□□□□ -1.46
SMD3YLR147C ETP1P38748 585 aaKnown RBP5.92□□□□□ -1.46
SMD3YLR147C SEC26P41810 973 aaKnown RBP5.92□□□□□ -1.46
SMD3YLR147C NOP7P53261 605 aaKnown RBP5.92□□□□□ -1.46
SMD3YLR147C SBA1P28707 216 aaKnown RBP5.91□□□□□ -1.46
SMD3YLR147C ELM1P32801 640 aa5.91□□□□□ -1.46
SMD3YLR147C PIN4P34217 668 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
SMD3YLR147C GEM1P39722 662 aa5.91□□□□□ -1.46
SMD3YLR147C FOL2P51601 243 aaKnown RBP5.91□□□□□ -1.46
SMD3YLR147C ACM1Q08981 209 aa5.91□□□□□ -1.46
SMD3YLR147C VBA5P36172 582 aa5.9□□□□□ -1.46
SMD3YLR147C UGA2P38067 497 aa5.9□□□□□ -1.46
SMD3YLR147C ATG13Q06628 738 aa5.9□□□□□ -1.46
SMD3YLR147C CDA2Q06703 312 aa5.9□□□□□ -1.46
SMD3YLR147C RNQ1P25367 405 aa5.89□□□□□ -1.47
SMD3YLR147C MBP1P39678 833 aa5.89□□□□□ -1.47
SMD3YLR147C BI4P03879 638 aa5.88□□□□□ -1.47
SMD3YLR147C GAS1P22146 559 aaKnown RBP5.88□□□□□ -1.47
SMD3YLR147C YKL151CP36059 337 aa5.88□□□□□ -1.47
SMD3YLR147C SPF1P39986 1215 aaKnown RBP5.88□□□□□ -1.47
SMD3YLR147C KRI1P42846 591 aaKnown RBP5.88□□□□□ -1.47
SMD3YLR147C MTC3P53077 123 aa5.88□□□□□ -1.47
SMD3YLR147C ENV11P53246 860 aa5.88□□□□□ -1.47
SMD3YLR147C MRPL22P53881 309 aa5.88□□□□□ -1.47
SMD3YLR147C SHE9Q04172 456 aa5.88□□□□□ -1.47
SMD3YLR147C SVS1Q12254 260 aa5.88□□□□□ -1.47
SMD3YLR147C ACE2P21192 770 aa5.87□□□□□ -1.47
SMD3YLR147C NIT1P40447 199 aa5.87□□□□□ -1.47
SMD3YLR147C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
SMD3YLR147C RIB2Q12362 591 aaKnown RBP5.87□□□□□ -1.47
SMD3YLR147C RFC5P38251 354 aa5.86□□□□□ -1.47
SMD3YLR147C HRQ1Q05549 1077 aa5.86□□□□□ -1.47
SMD3YLR147C SSF2Q12153 453 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms