RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	EFM2	P38347	419 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	VTC2	P43585	828 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	TMA22	P47089	198 aa	Predicted RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	ENT3	P47160	408 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	ESF2	P53743	316 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	HEH2	Q03281	663 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	CAB1	Q04430	367 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	YLH47	Q06493	454 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	BDF2	Q07442	638 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	NOP12	Q08208	459 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	ELG1	Q12050	791 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	GNT1	Q12096	491 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	RPS19A	P07280	144 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	RPS19B	P07281	144 aa	Predicted RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	ADE2	P21264	571 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	SCJ1	P25303	377 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	HIR2	P32480	875 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	FZO1	P38297	855 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	SMF1	P38925	575 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	SAK1	P38990	1142 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	SPC72	P39723	622 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	HFM1	P51979	1187 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	ZPR1	P53303	486 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	COP1	P53622	1201 aa	Known RBP	5.17	□□□□□ -1.58
CLF1	YLR117C	YNL144C	P53907	740 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	COG6	P53959	839 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	VAC14	Q06708	880 aa		5.17	□□□□□ -1.58
CLF1	YLR117C	YPR089W	O13585	888 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SEC23	P15303	768 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	HSP78	P33416	811 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	MRP8	P35719	219 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	TBS1	P38114	1094 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SAP185	P40856	1058 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	MSN5	P52918	1224 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	UTP22	P53254	1237 aa	Predicted RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	MAK10	Q02197	733 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SXM1	Q04175	944 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	GPR1	Q12361	961 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	PRP4	P20053	465 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	SEC20	P28791	383 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SEC6	P32844	805 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SEC8	P32855	1065 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	NUP120	P35729	1037 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	DBP7	P36120	742 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	AAP1	P37898	856 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	UBP13	P38187	747 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SEC27	P41811	889 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	GPD2	P41911	440 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	GYP7	P48365	746 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	IMD4	P50094	524 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	TEL2	P53038	688 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	ESBP6	P53918	673 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	MUB1	Q03162	620 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	SRT1	Q03175	343 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	CWC15	Q03772	175 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	HIM1	Q06674	414 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	MSH5	Q12175	901 aa		5.16	□□□□□ -1.58
CLF1	YLR117C	HTZ1	Q12692	134 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	UTP10	P42945	1769 aa	Known RBP	5.16	□□□□□ -1.58
CLF1	YLR117C	CDC8	P00572	216 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	HCA4	P20448	770 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	CBF2	P32504	956 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	YKT6	P36015	200 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	RIP-Chip
CLF1	YLR117C	YEL023C	P39992	682 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	ENP2	P48234	707 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	LSC1	P53598	329 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	SQS1	P53866	767 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	FAR11	P53917	953 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	UFD2	P54860	961 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	CEF1	Q03654	590 aa	Predicted RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	GIR2	Q03768	265 aa	Predicted RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	SPO71	Q03868	1245 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	RSM24	Q03976	319 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	POB3	Q04636	552 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	RIX7	Q07844	837 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	NOB1	Q08444	459 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	OSW1	Q08692	278 aa		5.15	□□□□□ -1.59
CLF1	YLR117C	URB1	P34241	1764 aa	Known RBP	5.15	□□□□□ -1.59
CLF1	YLR117C	TOM70	P07213	617 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	ITR2	P30606	609 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	BOI1	P38041	980 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	MCX1	P38323	520 aa	Predicted RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	SIP3	P38717	1229 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	MET18	P40469	1032 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	ECL1	P48235	211 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	RMD1	Q03441	430 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	PPM1	Q04081	328 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	TAP42	Q04372	366 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	FUS2	Q05670	677 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	PSK2	Q08217	1101 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	GPN2	Q08726	347 aa	Predicted RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	YIG1	Q08956	461 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	RIM20	Q12033	661 aa		5.14	□□□□□ -1.59
CLF1	YLR117C	TY1B-NL2	Q99337	1749 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	ENO2	P00925	437 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	LPD1	P09624	499 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	SBP1	P10080	294 aa	Known RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	GCD7	P32502	381 aa	Predicted RBP	5.14	□□□□□ -1.59
CLF1	YLR117C	STE13	P33894	931 aa		5.14	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms