RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C TY1A-LR2P0CX72 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-PLP0CX73 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-JR1P0CX74 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-LR3P0CX75 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-ML2P0CX76 440 aa5.03□□□□□ -1.6
SPB4YFL002C MCM7P38132 845 aa5.03□□□□□ -1.6
SPB4YFL002C NEM1P38757 446 aa5.03□□□□□ -1.6
SPB4YFL002C NUP85P46673 744 aa5.03□□□□□ -1.6
SPB4YFL002C YJL181WP46987 611 aa5.03□□□□□ -1.6
SPB4YFL002C LSC2P53312 427 aa5.03□□□□□ -1.6
SPB4YFL002C YNR065CP53751 1116 aa5.03□□□□□ -1.6
SPB4YFL002C VMS1Q04311 632 aaKnown RBP5.03□□□□□ -1.6
SPB4YFL002C TY1A-GR1Q12085 440 aa5.03□□□□□ -1.6
SPB4YFL002C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.03□□□□□ -1.6
SPB4YFL002C TY1A-OLQ92392 440 aaKnown RBP5.03□□□□□ -1.6
SPB4YFL002C DOM34P33309 386 aa5.02□□□□□ -1.61
SPB4YFL002C TFA2P36145 328 aa5.02□□□□□ -1.61
SPB4YFL002C PAN5P38787 379 aa5.02□□□□□ -1.61
SPB4YFL002C DSS1P39112 969 aa5.02□□□□□ -1.61
SPB4YFL002C MPH1P40562 993 aa5.02□□□□□ -1.61
SPB4YFL002C UBP6P43593 499 aaKnown RBP5.02□□□□□ -1.61
SPB4YFL002C DAS1P47005 663 aa5.02□□□□□ -1.61
SPB4YFL002C SDA1P53313 767 aaKnown RBP5.02□□□□□ -1.61
SPB4YFL002C HEH2Q03281 663 aa5.02□□□□□ -1.61
SPB4YFL002C RKM2Q03942 479 aa5.02□□□□□ -1.61
SPB4YFL002C SND1Q04007 877 aa5.02□□□□□ -1.61
SPB4YFL002C SOG2Q08817 791 aa5.02□□□□□ -1.61
SPB4YFL002C FAP7Q12055 197 aaPredicted RBP5.02□□□□□ -1.61
SPB4YFL002C TRX2P22803 104 aaKnown RBP5.02□□□□□ -1.61
SPB4YFL002C DPB3P27344 201 aa5.02□□□□□ -1.61
SPB4YFL002C SIP5P40210 489 aaKnown RBP5.02□□□□□ -1.61
SPB4YFL002C FET4P40988 552 aa5.02□□□□□ -1.61
SPB4YFL002C SLS1P42900 643 aa5.02□□□□□ -1.61
SPB4YFL002C LSB6P42951 607 aa5.02□□□□□ -1.61
SPB4YFL002C HNT2P49775 206 aa5.02□□□□□ -1.61
SPB4YFL002C UTP22P53254 1237 aaPredicted RBP5.02□□□□□ -1.61
SPB4YFL002C GIN4Q12263 1142 aa5.02□□□□□ -1.61
SPB4YFL002C THS1P04801 734 aaKnown RBP5.01□□□□□ -1.61
SPB4YFL002C GSY1P23337 708 aa5.01□□□□□ -1.61
SPB4YFL002C ARL1P38116 183 aaKnown RBP5.01□□□□□ -1.61
SPB4YFL002C YBR284WP38150 797 aa5.01□□□□□ -1.61
SPB4YFL002C YBR071WP38243 211 aa5.01□□□□□ -1.61
SPB4YFL002C SEC26P41810 973 aaKnown RBP5.01□□□□□ -1.61
SPB4YFL002C COG6P53959 839 aa5.01□□□□□ -1.61
SPB4YFL002C RAD53P22216 821 aa5□□□□□ -1.61
SPB4YFL002C VBA3P25594 458 aa5□□□□□ -1.61
SPB4YFL002C EUG1P32474 517 aa5□□□□□ -1.61
SPB4YFL002C AFG2P32794 780 aa5□□□□□ -1.61
SPB4YFL002C MGS1P40151 587 aa5□□□□□ -1.61
SPB4YFL002C GUS1P46655 708 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SPB4YFL002C HFD1Q04458 532 aa5□□□□□ -1.61
SPB4YFL002C YDR306CQ06640 478 aa5□□□□□ -1.61
SPB4YFL002C YIG1Q08956 461 aa5□□□□□ -1.61
SPB4YFL002C NYV1Q12255 253 aa5□□□□□ -1.61
SPB4YFL002C PET10P36139 283 aa5□□□□□ -1.61
SPB4YFL002C TYS1P36421 394 aaKnown RBP5□□□□□ -1.61
SPB4YFL002C BAP2P38084 609 aa5□□□□□ -1.61
SPB4YFL002C RGD1P38339 666 aa5□□□□□ -1.61
SPB4YFL002C BOI2P39969 1040 aa5□□□□□ -1.61
SPB4YFL002C GPP1P41277 250 aaKnown RBP5□□□□□ -1.61
SPB4YFL002C TGL2P54857 326 aa5□□□□□ -1.61
SPB4YFL002C ATG16Q03818 150 aa5□□□□□ -1.61
SPB4YFL002C TCB1Q12466 1186 aa5□□□□□ -1.61
SPB4YFL002C MSD1P15179 658 aaKnown RBP4.99□□□□□ -1.61
SPB4YFL002C MLS1P30952 554 aa4.99□□□□□ -1.61
SPB4YFL002C AAR2P32357 355 aaPredicted RBP4.99□□□□□ -1.61
SPB4YFL002C HIR1P32479 840 aa4.99□□□□□ -1.61
SPB4YFL002C SIT1P39980 628 aa4.99□□□□□ -1.61
SPB4YFL002C SPO71Q03868 1245 aa4.99□□□□□ -1.61
SPB4YFL002C TMA64Q04600 565 aaKnown RBP4.99□□□□□ -1.61
SPB4YFL002C GNT1Q12096 491 aa4.99□□□□□ -1.61
SPB4YFL002C YPR071WQ12346 211 aa4.99□□□□□ -1.61
SPB4YFL002C CDC19P00549 500 aaKnown RBP4.98□□□□□ -1.61
SPB4YFL002C ALG3P38179 458 aa4.98□□□□□ -1.61
SPB4YFL002C ATG14P38270 344 aa4.98□□□□□ -1.61
SPB4YFL002C GUP1P53154 560 aa4.98□□□□□ -1.61
SPB4YFL002C YGR021WP53212 290 aa4.98□□□□□ -1.61
SPB4YFL002C HAS1Q03532 505 aaKnown RBP4.98□□□□□ -1.61
SPB4YFL002C TRE2Q08693 809 aa4.98□□□□□ -1.61
SPB4YFL002C NKP1Q12493 238 aa4.98□□□□□ -1.61
SPB4YFL002C YEL1P34225 687 aa4.97□□□□□ -1.61
SPB4YFL002C MSC7P38694 644 aa4.97□□□□□ -1.61
SPB4YFL002C SAH1P39954 449 aaKnown RBP4.97□□□□□ -1.61
SPB4YFL002C PEA2P40091 420 aa4.97□□□□□ -1.61
SPB4YFL002C ALG2P43636 503 aa4.97□□□□□ -1.61
SPB4YFL002C PEX14P53112 341 aa4.97□□□□□ -1.61
SPB4YFL002C MTQ2Q03920 221 aaPredicted RBP4.97□□□□□ -1.61
SPB4YFL002C OPT2Q06593 877 aa4.97□□□□□ -1.61
SPB4YFL002C MRP10O75012 95 aa4.97□□□□□ -1.61
SPB4YFL002C PHR1P05066 565 aaKnown RBP RIP-Chip data4.97□□□□□ -1.61not detected
SPB4YFL002C NEO1P40527 1151 aa4.97□□□□□ -1.61
SPB4YFL002C YNR063WP53749 607 aa4.97□□□□□ -1.61
SPB4YFL002C MEC3Q02574 474 aa4.97□□□□□ -1.61
SPB4YFL002C MTC5Q03897 1148 aa4.97□□□□□ -1.61
SPB4YFL002C SPP382Q06411 708 aaPredicted RBP4.97□□□□□ -1.61
SPB4YFL002C PTC5Q12511 572 aa4.97□□□□□ -1.61
SPB4YFL002C ADE8P04161 214 aa4.96□□□□□ -1.62
SPB4YFL002C CDC9P04819 755 aa4.96□□□□□ -1.62
SPB4YFL002C PIF1P07271 859 aa4.96□□□□□ -1.62
SPB4YFL002C SRD1P09007 221 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms