RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W KAR5Q04746 504 aa2.57□□□□□ -2
PRP42YDR235W YCS4Q06156 1176 aa2.57□□□□□ -2
PRP42YDR235W AIM39Q08223 395 aa2.57□□□□□ -2
PRP42YDR235W SNF5P18480 905 aa2.57□□□□□ -2
PRP42YDR235W HRR25P29295 494 aaKnown RBP2.57□□□□□ -2
PRP42YDR235W PLB1P39105 664 aa2.57□□□□□ -2
PRP42YDR235W ACF4P47129 309 aa2.57□□□□□ -2
PRP42YDR235W GCV2P49095 1034 aa2.57□□□□□ -2
PRP42YDR235W NOC3Q07896 663 aaPredicted RBP2.57□□□□□ -2
PRP42YDR235W NOP12Q08208 459 aaKnown RBP2.57□□□□□ -2
PRP42YDR235W HMI1Q12039 706 aa2.57□□□□□ -2
PRP42YDR235W SIP5P40210 489 aaKnown RBP2.56□□□□□ -2
PRP42YDR235W QRI1P43123 477 aaKnown RBP2.56□□□□□ -2
PRP42YDR235W IOC3P43596 787 aa2.56□□□□□ -2
PRP42YDR235W RIB2Q12362 591 aaKnown RBP2.56□□□□□ -2
PRP42YDR235W APL1P27351 700 aa2.55□□□□□ -2
PRP42YDR235W RSM26P47141 266 aa2.55□□□□□ -2
PRP42YDR235W PTC5Q12511 572 aa2.55□□□□□ -2
PRP42YDR235W ATG1P53104 897 aa2.54□□□□□ -2
PRP42YDR235W PFK1P16861 987 aaKnown RBP2.53□□□□□ -2
PRP42YDR235W RPN3P40016 523 aaKnown RBP2.53□□□□□ -2
PRP42YDR235W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PRP42YDR235W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
PRP42YDR235W AFG2P32794 780 aa2.53□□□□□ -2
PRP42YDR235W SQT1P35184 431 aa2.53□□□□□ -2
PRP42YDR235W RDH54P38086 958 aa2.53□□□□□ -2
PRP42YDR235W PEX28P38848 579 aa2.53□□□□□ -2
PRP42YDR235W SIZ1Q04195 904 aa2.53□□□□□ -2
PRP42YDR235W TMN2Q04562 672 aa2.53□□□□□ -2
PRP42YDR235W SVS1Q12254 260 aa2.53□□□□□ -2
PRP42YDR235W SAM37P50110 327 aa2.52□□□□□ -2.01
PRP42YDR235W EST2Q06163 884 aa2.52□□□□□ -2.01
PRP42YDR235W MCH5Q08777 521 aa2.51□□□□□ -2.01
PRP42YDR235W YPL260WQ08977 551 aa2.51□□□□□ -2.01
PRP42YDR235W CIC1P38779 376 aaKnown RBP2.5□□□□□ -2.01
PRP42YDR235W YER158CP40095 573 aa2.5□□□□□ -2.01
PRP42YDR235W YFL054CP43549 646 aa2.5□□□□□ -2.01
PRP42YDR235W EXG2P52911 562 aa2.5□□□□□ -2.01
PRP42YDR235W IRC10Q08118 586 aa2.5□□□□□ -2.01
PRP42YDR235W UGA4P32837 571 aa2.5□□□□□ -2.01
PRP42YDR235W ALG3P38179 458 aa2.5□□□□□ -2.01
PRP42YDR235W MSC2Q03455 724 aa2.5□□□□□ -2.01
PRP42YDR235W TPO1Q07824 586 aa2.5□□□□□ -2.01
PRP42YDR235W GPI13Q07830 1017 aa2.5□□□□□ -2.01
PRP42YDR235W NDJ1Q12366 352 aa2.5□□□□□ -2.01
PRP42YDR235W KAR2P16474 682 aaKnown RBP2.49□□□□□ -2.01
PRP42YDR235W PEP7P32609 515 aa2.49□□□□□ -2.01
PRP42YDR235W PRP40P33203 583 aaKnown RBP2.49□□□□□ -2.01
PRP42YDR235W DAK2P43550 591 aa2.49□□□□□ -2.01
PRP42YDR235W YGL140CP53120 1219 aa2.49□□□□□ -2.01
PRP42YDR235W ULP1Q02724 621 aa2.49□□□□□ -2.01
PRP42YDR235W YOL073CQ08232 322 aa2.49□□□□□ -2.01
PRP42YDR235W HEM13P11353 328 aaKnown RBP2.48□□□□□ -2.01
PRP42YDR235W MET12P46151 657 aa2.48□□□□□ -2.01
PRP42YDR235W STB4P50104 949 aa2.48□□□□□ -2.01
PRP42YDR235W AFT2Q08957 416 aa2.48□□□□□ -2.01
PRP42YDR235W HIS5P07172 385 aa2.47□□□□□ -2.01
PRP42YDR235W POA1P38218 177 aa2.47□□□□□ -2.01
PRP42YDR235W SUL1P38359 859 aa2.47□□□□□ -2.01
PRP42YDR235W MND2P40577 368 aa2.47□□□□□ -2.01
PRP42YDR235W YLR040CQ07988 224 aa2.47□□□□□ -2.01
PRP42YDR235W DED1P06634 604 aaKnown RBP2.46□□□□□ -2.02
PRP42YDR235W EFT1P32324 842 aaKnown RBP2.46□□□□□ -2.02
PRP42YDR235W ATG13Q06628 738 aa2.46□□□□□ -2.02
PRP42YDR235W ADY3Q07732 790 aa2.46□□□□□ -2.02
PRP42YDR235W YAP7Q08182 245 aa2.46□□□□□ -2.02
PRP42YDR235W PEX2P32800 271 aa2.46□□□□□ -2.02
PRP42YDR235W CHA4P43634 648 aa2.46□□□□□ -2.02
PRP42YDR235W TIM44Q01852 431 aa2.46□□□□□ -2.02
PRP42YDR235W DAL4Q04895 635 aa2.46□□□□□ -2.02
PRP42YDR235W OMS1Q06668 471 aa2.46□□□□□ -2.02
PRP42YDR235W ACF2Q12168 779 aa2.46□□□□□ -2.02
PRP42YDR235W ICT1Q12385 394 aa2.46□□□□□ -2.02
PRP42YDR235W KCS1Q12494 1050 aa2.46□□□□□ -2.02
PRP42YDR235W TRL1P09880 827 aaKnown RBP2.45□□□□□ -2.02
PRP42YDR235W SEC23P15303 768 aaKnown RBP2.45□□□□□ -2.02
PRP42YDR235W MTH1P35198 433 aa2.45□□□□□ -2.02
PRP42YDR235W YMR206WQ03695 313 aa2.45□□□□□ -2.02
PRP42YDR235W RPP2AP05319 106 aaKnown RBP2.44□□□□□ -2.02
PRP42YDR235W DMA2P53924 522 aa2.44□□□□□ -2.02
PRP42YDR235W HOF1Q05080 669 aa2.44□□□□□ -2.02
PRP42YDR235W ENB1Q08299 606 aa2.44□□□□□ -2.02
PRP42YDR235W FRT1Q99332 602 aa2.44□□□□□ -2.02
PRP42YDR235W MDM10P18409 493 aa2.43□□□□□ -2.02
PRP42YDR235W GRS1P38088 690 aaKnown RBP2.43□□□□□ -2.02
PRP42YDR235W KTR4P38131 464 aa2.43□□□□□ -2.02
PRP42YDR235W ADI1Q03677 179 aa2.43□□□□□ -2.02
PRP42YDR235W ACE2P21192 770 aa2.42□□□□□ -2.02
PRP42YDR235W SPC42P36094 363 aa2.42□□□□□ -2.02
PRP42YDR235W ZRG8P40021 1076 aa2.42□□□□□ -2.02
PRP42YDR235W GND2P53319 492 aa2.42□□□□□ -2.02
PRP42YDR235W LAS17Q12446 633 aa2.42□□□□□ -2.02
PRP42YDR235W YER152CP10356 443 aa2.42□□□□□ -2.02
PRP42YDR235W ENA1P13587 1091 aa2.42□□□□□ -2.02
PRP42YDR235W ENA2Q01896 1091 aa2.42□□□□□ -2.02
PRP42YDR235W RAT1Q02792 1006 aaKnown RBP2.42□□□□□ -2.02
PRP42YDR235W NUT2Q06213 157 aa2.42□□□□□ -2.02
PRP42YDR235W ENA5Q12691 1091 aa2.42□□□□□ -2.02
PRP42YDR235W ERG4P25340 473 aa2.41□□□□□ -2.02
PRP42YDR235W BUL1P48524 976 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms