RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W TRK2P28584 889 aa6.59□□□□□ -1.35
CKS1YBR135W TIM23P32897 222 aa6.59□□□□□ -1.35
CKS1YBR135W QNS1P38795 714 aaKnown RBP6.59□□□□□ -1.35
CKS1YBR135W MBP1P39678 833 aa6.59□□□□□ -1.35
CKS1YBR135W SBE2P42223 864 aaKnown RBP6.59□□□□□ -1.35
CKS1YBR135W UTP8P53276 713 aaKnown RBP6.59□□□□□ -1.35
CKS1YBR135W NCE103P53615 221 aa6.59□□□□□ -1.35
CKS1YBR135W GGA2P38817 585 aaKnown RBP6.58□□□□□ -1.36
CKS1YBR135W SIP5P40210 489 aaKnown RBP6.58□□□□□ -1.36
CKS1YBR135W YNR014WP53719 212 aa6.58□□□□□ -1.36
CKS1YBR135W YPL260WQ08977 551 aa6.58□□□□□ -1.36
CKS1YBR135W PRP9P19736 530 aaKnown RBP6.57□□□□□ -1.36
CKS1YBR135W RET1P22276 1149 aaKnown RBP6.57□□□□□ -1.36
CKS1YBR135W SFA1P32771 386 aa6.57□□□□□ -1.36
CKS1YBR135W NNK1P36003 928 aa6.57□□□□□ -1.36
CKS1YBR135W YLR257WQ06146 321 aaKnown RBP6.57□□□□□ -1.36
CKS1YBR135W EAF1Q06337 982 aa6.57□□□□□ -1.36
CKS1YBR135W ARE1P25628 610 aa6.56□□□□□ -1.36
CKS1YBR135W SMY2P32909 740 aaKnown RBP6.56□□□□□ -1.36
CKS1YBR135W GPT2P36148 743 aa6.56□□□□□ -1.36
CKS1YBR135W MSH4P40965 878 aaPredicted RBP6.56□□□□□ -1.36
CKS1YBR135W BUD9P53226 547 aa6.56□□□□□ -1.36
CKS1YBR135W GAS5Q08193 484 aa6.56□□□□□ -1.36
CKS1YBR135W CAN1P04817 590 aa6.55□□□□□ -1.36
CKS1YBR135W YER152CP10356 443 aa6.55□□□□□ -1.36
CKS1YBR135W PHO8P11491 566 aa6.55□□□□□ -1.36
CKS1YBR135W NFS1P25374 497 aa6.55□□□□□ -1.36
CKS1YBR135W KIP1P28742 1111 aa6.55□□□□□ -1.36
CKS1YBR135W FPR3P38911 411 aaKnown RBP6.55□□□□□ -1.36
CKS1YBR135W TAF8Q03750 510 aa6.55□□□□□ -1.36
CKS1YBR135W UBX5Q06682 500 aa6.55□□□□□ -1.36
CKS1YBR135W YLR125WQ12138 136 aa6.55□□□□□ -1.36
CKS1YBR135W SPO21Q12411 609 aa6.55□□□□□ -1.36
CKS1YBR135W PNT1P38969 423 aa6.54□□□□□ -1.36
CKS1YBR135W YFL066CP43538 392 aa6.54□□□□□ -1.36
CKS1YBR135W ALR2P43553 858 aa6.54□□□□□ -1.36
CKS1YBR135W SPP382Q06411 708 aaPredicted RBP6.54□□□□□ -1.36
CKS1YBR135W HRK1Q08732 759 aaKnown RBP6.54□□□□□ -1.36
CKS1YBR135W AI3P03877 415 aa6.53□□□□□ -1.36
CKS1YBR135W MET6P05694 767 aaKnown RBP6.53□□□□□ -1.36
CKS1YBR135W ERR1P0CX10 437 aa6.53□□□□□ -1.36
CKS1YBR135W ERR2P0CX11 437 aa6.53□□□□□ -1.36
CKS1YBR135W MCX1P38323 520 aaPredicted RBP6.53□□□□□ -1.36
CKS1YBR135W HUL4P40985 892 aa6.53□□□□□ -1.36
CKS1YBR135W ALT1P52893 592 aa6.53□□□□□ -1.36
CKS1YBR135W RTA1P53047 317 aa6.53□□□□□ -1.36
CKS1YBR135W RSC6P25632 483 aa6.52□□□□□ -1.37
CKS1YBR135W HBS1P32769 611 aaKnown RBP6.52□□□□□ -1.37
CKS1YBR135W GPB2P39717 880 aa6.52□□□□□ -1.37
CKS1YBR135W RPN3P40016 523 aaKnown RBP6.52□□□□□ -1.37
CKS1YBR135W GUS1P46655 708 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
CKS1YBR135W YJL045WP47052 634 aa6.52□□□□□ -1.37
CKS1YBR135W TDA6Q06466 467 aa6.52□□□□□ -1.37
CKS1YBR135W RPL11AP0C0W9 174 aaKnown RBP6.51□□□□□ -1.37
CKS1YBR135W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37 RIP-Chip
CKS1YBR135W RPL11BQ3E757 174 aaPredicted RBP6.51□□□□□ -1.37
CKS1YBR135W DBP2P24783 546 aaKnown RBP6.5□□□□□ -1.37
CKS1YBR135W BET3P36149 193 aa6.5□□□□□ -1.37
CKS1YBR135W NMD3P38861 518 aaKnown RBP6.5□□□□□ -1.37
CKS1YBR135W CCC2P38995 1004 aa6.5□□□□□ -1.37
CKS1YBR135W YDL124WQ07551 312 aaKnown RBP6.5□□□□□ -1.37
CKS1YBR135W THI72Q08579 599 aa6.5□□□□□ -1.37
CKS1YBR135W PUS7Q08647 676 aaKnown RBP6.5□□□□□ -1.37
CKS1YBR135W RPS4AP0CX35 261 aaKnown RBP6.49□□□□□ -1.37
CKS1YBR135W RPS4BP0CX36 261 aaKnown RBP6.49□□□□□ -1.37
CKS1YBR135W THI4P32318 326 aa6.49□□□□□ -1.37
CKS1YBR135W MNN1P39106 762 aa6.49□□□□□ -1.37
CKS1YBR135W ARI1P53111 347 aaKnown RBP6.49□□□□□ -1.37
CKS1YBR135W TPO2P53283 614 aa6.49□□□□□ -1.37
CKS1YBR135W TPP1Q03796 238 aa6.49□□□□□ -1.37
CKS1YBR135W POB3Q04636 552 aaKnown RBP6.49□□□□□ -1.37
CKS1YBR135W YDR306CQ06640 478 aa6.49□□□□□ -1.37
CKS1YBR135W HBN1Q96VH4 193 aa6.49□□□□□ -1.37
CKS1YBR135W YSC84P32793 468 aa6.48□□□□□ -1.37
CKS1YBR135W MXR1P40029 184 aa6.48□□□□□ -1.37
CKS1YBR135W GIC2Q06648 383 aa6.48□□□□□ -1.37
CKS1YBR135W CDC11P32458 415 aa6.47□□□□□ -1.37
CKS1YBR135W SCT1P32784 759 aa6.47□□□□□ -1.37
CKS1YBR135W SIT1P39980 628 aa6.47□□□□□ -1.37
CKS1YBR135W PRY1P47032 299 aa6.47□□□□□ -1.37
CKS1YBR135W NSG2P53898 299 aa6.47□□□□□ -1.37
CKS1YBR135W HOS3Q02959 697 aaKnown RBP6.47□□□□□ -1.37
CKS1YBR135W EAR1Q03212 550 aa6.47□□□□□ -1.37
CKS1YBR135W DUS3Q06053 668 aaKnown RBP6.47□□□□□ -1.37
CKS1YBR135W YDR215CQ12240 137 aa6.47□□□□□ -1.37
CKS1YBR135W TCB3Q03640 1545 aaKnown RBP6.46□□□□□ -1.37
CKS1YBR135W SNF5P18480 905 aa6.46□□□□□ -1.38
CKS1YBR135W SLA2P33338 968 aa6.46□□□□□ -1.38
CKS1YBR135W GEM1P39722 662 aa6.46□□□□□ -1.38
CKS1YBR135W TNA1P53322 534 aa6.46□□□□□ -1.38
CKS1YBR135W ACM1Q08981 209 aa6.46□□□□□ -1.38
CKS1YBR135W TOP3P13099 656 aa6.45□□□□□ -1.38
CKS1YBR135W MSH2P25847 964 aa6.45□□□□□ -1.38
CKS1YBR135W AAR2P32357 355 aaPredicted RBP6.45□□□□□ -1.38
CKS1YBR135W CDC12P32468 407 aaKnown RBP6.45□□□□□ -1.38
CKS1YBR135W BAP2P38084 609 aa6.45□□□□□ -1.38
CKS1YBR135W UTP14Q04500 899 aaKnown RBP6.45□□□□□ -1.38
CKS1YBR135W YCK2P23292 546 aaKnown RBP6.44□□□□□ -1.38
CKS1YBR135W MDJ1P35191 511 aa6.44□□□□□ -1.38
CKS1YBR135W YFL054CP43549 646 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms