RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C RAD1P06777 1100 aa4.5□□□□□ -1.69
PTA1YAL043C PDC6P26263 563 aaKnown RBP4.5□□□□□ -1.69
PTA1YAL043C MCD4P36051 919 aa4.5□□□□□ -1.69
PTA1YAL043C PET10P36139 283 aa4.5□□□□□ -1.69
PTA1YAL043C RXT2P38255 430 aa4.5□□□□□ -1.69
PTA1YAL043C ERG7P38604 731 aa4.5□□□□□ -1.69
PTA1YAL043C ALD2P47771 506 aa4.5□□□□□ -1.69
PTA1YAL043C LYS4P49367 693 aaPredicted RBP4.5□□□□□ -1.69
PTA1YAL043C SFH1Q06168 426 aa4.5□□□□□ -1.69
PTA1YAL043C CIT1P00890 479 aa4.49□□□□□ -1.69
PTA1YAL043C TOM70P07213 617 aaKnown RBP4.49□□□□□ -1.69
PTA1YAL043C RAD53P22216 821 aa4.49□□□□□ -1.69
PTA1YAL043C ADY4Q05955 493 aa4.49□□□□□ -1.69
PTA1YAL043C DPH6Q12429 685 aa4.49□□□□□ -1.69
PTA1YAL043C YRF1-3P0CX14 1859 aa4.49□□□□□ -1.69
PTA1YAL043C YRF1-7P0CX15 1859 aa4.49□□□□□ -1.69
PTA1YAL043C YRF1-6P53819 1859 aa4.49□□□□□ -1.69
PTA1YAL043C COX6P00427 148 aa4.49□□□□□ -1.69
PTA1YAL043C PHO13P19881 312 aa4.49□□□□□ -1.69
PTA1YAL043C MAK31P23059 88 aa4.49□□□□□ -1.69
PTA1YAL043C BMH2P34730 273 aaKnown RBP4.49□□□□□ -1.69
PTA1YAL043C MIP6P38760 659 aaKnown RBP4.49□□□□□ -1.69
PTA1YAL043C CTM1P38818 585 aa4.49□□□□□ -1.69
PTA1YAL043C YMR124WP39523 943 aaKnown RBP4.49□□□□□ -1.69
PTA1YAL043C ICP55P40051 511 aa4.49□□□□□ -1.69
PTA1YAL043C IES1P43579 692 aa4.49□□□□□ -1.69
PTA1YAL043C SOV1Q04748 898 aa4.49□□□□□ -1.69
PTA1YAL043C YDR341CQ05506 607 aaKnown RBP4.49□□□□□ -1.69
PTA1YAL043C YOR296WQ08748 1289 aa4.49□□□□□ -1.69
PTA1YAL043C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
PTA1YAL043C MAL31P38156 614 aa4.48□□□□□ -1.69
PTA1YAL043C CCT4P39078 528 aaKnown RBP4.48□□□□□ -1.69
PTA1YAL043C VPS8P39702 1274 aa4.48□□□□□ -1.69
PTA1YAL043C SHQ1P40486 507 aaPredicted RBP4.48□□□□□ -1.69
PTA1YAL043C VPS72Q03388 795 aa4.48□□□□□ -1.69
PTA1YAL043C SML1Q04964 104 aa4.48□□□□□ -1.69
PTA1YAL043C YLH47Q06493 454 aa4.48□□□□□ -1.69
PTA1YAL043C BDF2Q07442 638 aa4.48□□□□□ -1.69
PTA1YAL043C OXR1Q08952 273 aa4.48□□□□□ -1.69
PTA1YAL043C PIF1P07271 859 aa4.48□□□□□ -1.69
PTA1YAL043C LCB1P25045 558 aaKnown RBP4.48□□□□□ -1.69
PTA1YAL043C YKL091CP33324 310 aaKnown RBP4.48□□□□□ -1.69
PTA1YAL043C RFT1P38206 574 aaPredicted RBP4.48□□□□□ -1.69
PTA1YAL043C DSN1P40568 576 aa4.48□□□□□ -1.69
PTA1YAL043C TPO2P53283 614 aa4.48□□□□□ -1.69
PTA1YAL043C UTP14Q04500 899 aaKnown RBP4.48□□□□□ -1.69
PTA1YAL043C SUE1Q06524 206 aa4.48□□□□□ -1.69
PTA1YAL043C SAC3P46674 1301 aa4.47□□□□□ -1.69
PTA1YAL043C PBS2P08018 668 aa4.47□□□□□ -1.69
PTA1YAL043C CBP3P21560 335 aa4.47□□□□□ -1.69
PTA1YAL043C ECM1P39715 212 aa4.47□□□□□ -1.69
PTA1YAL043C NPR2P39923 615 aa4.47□□□□□ -1.69
PTA1YAL043C MIC19P43594 170 aa4.47□□□□□ -1.69
PTA1YAL043C JJJ2P46997 583 aa4.47□□□□□ -1.69
PTA1YAL043C PEX21P50091 288 aa4.47□□□□□ -1.69
PTA1YAL043C UBA2P52488 636 aa4.47□□□□□ -1.69
PTA1YAL043C CUE3P53137 624 aaKnown RBP4.47□□□□□ -1.69
PTA1YAL043C GRX3Q03835 250 aa4.47□□□□□ -1.69
PTA1YAL043C YMR114CQ04471 368 aaKnown RBP4.47□□□□□ -1.69
PTA1YAL043C AIM33Q04516 312 aa4.47□□□□□ -1.69
PTA1YAL043C IRC3Q06683 689 aa4.47□□□□□ -1.69
PTA1YAL043C YAP7Q08182 245 aa4.47□□□□□ -1.69
PTA1YAL043C OM45P16547 393 aa4.47□□□□□ -1.69
PTA1YAL043C RAD57P25301 460 aa4.47□□□□□ -1.69
PTA1YAL043C RPL8BP29453 256 aaKnown RBP4.47□□□□□ -1.69
PTA1YAL043C PPS1P38148 807 aa4.47□□□□□ -1.69
PTA1YAL043C CIT3P43635 486 aa4.47□□□□□ -1.69
PTA1YAL043C AIP1P46680 615 aaKnown RBP4.47□□□□□ -1.69
PTA1YAL043C PIP2P52960 996 aa4.47□□□□□ -1.69
PTA1YAL043C ERG5P54781 538 aa4.47□□□□□ -1.69
PTA1YAL043C HOT1Q03213 719 aa4.47□□□□□ -1.69
PTA1YAL043C YML082WQ04533 649 aaKnown RBP4.47□□□□□ -1.69
PTA1YAL043C VAC14Q06708 880 aa4.47□□□□□ -1.69
PTA1YAL043C UTP10P42945 1769 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C GFA1P14742 717 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C RNR3P21672 869 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C MYO3P36006 1272 aa4.46□□□□□ -1.7
PTA1YAL043C XDJ1P39102 459 aa4.46□□□□□ -1.7
PTA1YAL043C ULP2P40537 1034 aaPredicted RBP4.46□□□□□ -1.7
PTA1YAL043C IOC3P43596 787 aa4.46□□□□□ -1.7
PTA1YAL043C HFM1P51979 1187 aa4.46□□□□□ -1.7
PTA1YAL043C BOP3P53958 396 aa4.46□□□□□ -1.7
PTA1YAL043C YNL011CP53980 444 aa4.46□□□□□ -1.7
PTA1YAL043C RPT6Q01939 405 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C GDE1Q02979 1223 aa4.46□□□□□ -1.7
PTA1YAL043C YPL260WQ08977 551 aa4.46□□□□□ -1.7
PTA1YAL043C RUD3Q12234 484 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C PET111P08468 800 aa4.46□□□□□ -1.7
PTA1YAL043C RNA1P11745 407 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C RPO26P20435 155 aa4.46□□□□□ -1.7
PTA1YAL043C PSE1P32337 1089 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C JNM1P36224 373 aa4.46□□□□□ -1.7
PTA1YAL043C MED8P38304 223 aa4.46□□□□□ -1.7
PTA1YAL043C NDT80P38830 627 aa4.46□□□□□ -1.7
PTA1YAL043C YFH7P43591 353 aa4.46□□□□□ -1.7
PTA1YAL043C TOS3P43637 560 aa4.46□□□□□ -1.7
PTA1YAL043C ASE1P50275 885 aa4.46□□□□□ -1.7
PTA1YAL043C RAT1Q02792 1006 aaKnown RBP4.46□□□□□ -1.7
PTA1YAL043C OMS1Q06668 471 aa4.46□□□□□ -1.7
PTA1YAL043C GAS5Q08193 484 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms