RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 TRPC5Q9UL62 973 aaPredicted RBP14.28□□□□□ -0.12
GFAP-238ENST00000640859 NCAPD2Q15021 1401 aa14.27□□□□□ -0.12
GFAP-238ENST00000640859 MAP3K5Q99683 1374 aa14.27□□□□□ -0.12
GFAP-238ENST00000640859 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.13
GFAP-238ENST00000640859 ANP32AP39687 249 aaKnown RBP14.27□□□□□ -0.13
GFAP-238ENST00000640859 C8orf34Q49A92 452 aa14.27□□□□□ -0.13
GFAP-238ENST00000640859 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
GFAP-238ENST00000640859 FNBP4Q8N3X1 1017 aaPredicted RBP14.27□□□□□ -0.13
GFAP-238ENST00000640859 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
GFAP-238ENST00000640859 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.13
GFAP-238ENST00000640859 BTG4Q9NY30 223 aa14.27□□□□□ -0.13
GFAP-238ENST00000640859 ABCB7O75027 752 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 CHRNA2Q15822 529 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 USHBP1Q8N6Y0 703 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 IL17REQ8NFR9 667 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 BABAM1Q9NWV8 329 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
GFAP-238ENST00000640859 DSG3P32926 999 aa14.25□□□□□ -0.13
GFAP-238ENST00000640859 IPO9Q96P70 1041 aaKnown RBP14.25□□□□□ -0.13
GFAP-238ENST00000640859 QTRT2Q9H974 415 aaKnown RBP14.25□□□□□ -0.13
GFAP-238ENST00000640859 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
GFAP-238ENST00000640859 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
GFAP-238ENST00000640859 CAMTA1Q9Y6Y1 1673 aa14.24□□□□□ -0.13
GFAP-238ENST00000640859 SMC5Q8IY18 1101 aa14.24□□□□□ -0.13
GFAP-238ENST00000640859 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
GFAP-238ENST00000640859 RGS12O14924 1447 aa14.24□□□□□ -0.13
GFAP-238ENST00000640859 RXRBP28702 533 aa14.23□□□□□ -0.13
GFAP-238ENST00000640859 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
GFAP-238ENST00000640859 TAF7Q15545 349 aaPredicted RBP14.22□□□□□ -0.13
GFAP-238ENST00000640859 LMO7Q8WWI1 1683 aa14.22□□□□□ -0.13
GFAP-238ENST00000640859 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
GFAP-238ENST00000640859 COL14A1Q05707 1796 aaKnown RBP14.22□□□□□ -0.13
GFAP-238ENST00000640859 RGPD5Q99666 1765 aa14.22□□□□□ -0.13
GFAP-238ENST00000640859 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
GFAP-238ENST00000640859 PTPRCP08575 1304 aa14.21□□□□□ -0.13
GFAP-238ENST00000640859 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
GFAP-238ENST00000640859 A0A0G2JS52 829 aa14.21□□□□□ -0.13
GFAP-238ENST00000640859 RBM6P78332 1123 aaKnown RBP14.21□□□□□ -0.13
GFAP-238ENST00000640859 MYT1Q01538 1121 aa14.21□□□□□ -0.13
GFAP-238ENST00000640859 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.13
GFAP-238ENST00000640859 ANKRD24Q8TF21 1146 aa14.21□□□□□ -0.13
GFAP-238ENST00000640859 COL18A1P39060 1754 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 VPS72Q15906 364 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 PLEKHO1Q53GL0 409 aaPredicted RBP14.2□□□□□ -0.14
GFAP-238ENST00000640859 NPM2Q86SE8 214 aaKnown RBP14.2□□□□□ -0.14
GFAP-238ENST00000640859 ANP32EQ9BTT0 268 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 AXIN2Q9Y2T1 843 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 ABCA3Q99758 1704 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 SLIT2O94813 1529 aa14.2□□□□□ -0.14
GFAP-238ENST00000640859 GJD4Q96KN9 370 aaPredicted RBP14.19□□□□□ -0.14
GFAP-238ENST00000640859 ABCC6O95255 1503 aa14.19□□□□□ -0.14
GFAP-238ENST00000640859 AMOTQ4VCS5 1084 aa14.18□□□□□ -0.14
GFAP-238ENST00000640859 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
GFAP-238ENST00000640859 NOP58Q9Y2X3 529 aaKnown RBP14.18□□□□□ -0.14
GFAP-238ENST00000640859 CRYBG1Q9Y4K1 1723 aa14.18□□□□□ -0.14
GFAP-238ENST00000640859 FAM208AQ9UK61 1670 aaKnown RBP14.17□□□□□ -0.14
GFAP-238ENST00000640859 KDM3BQ7LBC6 1761 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 NUCB1Q02818 461 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 G2E3Q7L622 706 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 SIRT2Q8IXJ6 389 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 LGR6Q9HBX8 967 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 NLRP2Q9NX02 1062 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 USP35Q9P2H5 1018 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
GFAP-238ENST00000640859 BCL9LQ86UU0 1499 aa14.17□□□□□ -0.14
GFAP-238ENST00000640859 WDR17Q8IZU2 1322 aa14.16□□□□□ -0.14
GFAP-238ENST00000640859 NWD2Q9ULI1 1742 aa14.16□□□□□ -0.14
GFAP-238ENST00000640859 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
GFAP-238ENST00000640859 CCDC30Q5VVM6 783 aa14.16□□□□□ -0.14
GFAP-238ENST00000640859 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
GFAP-238ENST00000640859 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
GFAP-238ENST00000640859 C1orf115Q9H7X2 142 aa14.16□□□□□ -0.14
GFAP-238ENST00000640859 OVOS2A0A0G2JMS6 1433 aa14.15□□□□□ -0.14
GFAP-238ENST00000640859 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
GFAP-238ENST00000640859 ZBTB47Q9UFB7 747 aaPredicted RBP14.15□□□□□ -0.14
GFAP-238ENST00000640859 ATRNO75882 1429 aa14.15□□□□□ -0.14
GFAP-238ENST00000640859 ERBB3P21860 1342 aa14.15□□□□□ -0.15
GFAP-238ENST00000640859 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
GFAP-238ENST00000640859 EIF4A1P60842 406 aaKnown RBP14.14□□□□□ -0.15
GFAP-238ENST00000640859 LARP1Q6PKG0 1096 aaKnown RBP14.14□□□□□ -0.15
GFAP-238ENST00000640859 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 ERICH6Q7L0X2 663 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 STK31Q9BXU1 1019 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 RGS17Q9UGC6 210 aaPredicted RBP14.14□□□□□ -0.15
GFAP-238ENST00000640859 SPATA31A5Q5VU36 1347 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 SPATA31A7Q8IWB4 1347 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 ADAMTS7Q9UKP4 1686 aa14.14□□□□□ -0.15
GFAP-238ENST00000640859 COL5A2P05997 1499 aaPredicted RBP14.13□□□□□ -0.15
GFAP-238ENST00000640859 CHD1LQ86WJ1 897 aa14.13□□□□□ -0.15
GFAP-238ENST00000640859 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
GFAP-238ENST00000640859 CARD10Q9BWT7 1032 aa14.13□□□□□ -0.15
GFAP-238ENST00000640859 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
GFAP-238ENST00000640859 SIPA1L3O60292 1781 aaPredicted RBP14.12□□□□□ -0.15
GFAP-238ENST00000640859 N4BP2Q86UW6 1770 aaPredicted RBP14.12□□□□□ -0.15
GFAP-238ENST00000640859 HOXB7P09629 217 aa14.12□□□□□ -0.15
GFAP-238ENST00000640859 CCT4P50991 539 aaKnown RBP14.12□□□□□ -0.15
GFAP-238ENST00000640859 ANKRD44Q8N8A2 993 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms