RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 WDR43Q15061 677 aaKnown RBP eCLIP10.55□□□□□ -0.72
SCARB2-220ENST00000640076 CABLES1Q8TDN4 633 aa10.55□□□□□ -0.72
SCARB2-220ENST00000640076 FLT4P35916 1363 aa10.55□□□□□ -0.72
SCARB2-220ENST00000640076 ARHGEF25Q86VW2 580 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
SCARB2-220ENST00000640076 ABCA3Q99758 1704 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 DIAPH1O60610 1272 aaKnown RBP10.54□□□□□ -0.72
SCARB2-220ENST00000640076 AMPHP49418 695 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 HSP90AB2PQ58FF8 381 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
SCARB2-220ENST00000640076 IGSF5Q9NSI5 407 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 ADAMTS8Q9UP79 889 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
SCARB2-220ENST00000640076 COL22A1Q8NFW1 1626 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-220ENST00000640076 FECHP22830 423 aa10.53□□□□□ -0.72
SCARB2-220ENST00000640076 HOXC9P31274 260 aa10.53□□□□□ -0.72
SCARB2-220ENST00000640076 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
SCARB2-220ENST00000640076 IL13P35225 146 aa10.52□□□□□ -0.72
SCARB2-220ENST00000640076 ZC3H6P61129 1189 aaKnown RBP10.52□□□□□ -0.72
SCARB2-220ENST00000640076 HIC1Q14526 733 aa10.52□□□□□ -0.72
SCARB2-220ENST00000640076 IP6K1Q92551 441 aa10.52□□□□□ -0.72
SCARB2-220ENST00000640076 NUDCQ9Y266 331 aa10.52□□□□□ -0.72
SCARB2-220ENST00000640076 CPDO75976 1380 aa10.52□□□□□ -0.73
SCARB2-220ENST00000640076 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.73
SCARB2-220ENST00000640076 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.731e-8■■■□□ 18.6
SCARB2-220ENST00000640076 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
SCARB2-220ENST00000640076 UNCXA6NJT0 531 aa10.51□□□□□ -0.73
SCARB2-220ENST00000640076 U2SURPO15042 1029 aaKnown RBP10.51□□□□□ -0.73
SCARB2-220ENST00000640076 EIF4A2Q14240 407 aaKnown RBP10.51□□□□□ -0.73
SCARB2-220ENST00000640076 CALR3Q96L12 384 aaKnown RBP10.51□□□□□ -0.73
SCARB2-220ENST00000640076 EMILIN3Q9NT22 766 aa10.51□□□□□ -0.73
SCARB2-220ENST00000640076 KIAA0232Q92628 1395 aa10.51□□□□□ -0.73
SCARB2-220ENST00000640076 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-220ENST00000640076 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.73
SCARB2-220ENST00000640076 MS4A4AQ96JQ5 239 aa10.5□□□□□ -0.73
SCARB2-220ENST00000640076 COL18A1P39060 1754 aa10.5□□□□□ -0.73
SCARB2-220ENST00000640076 ABCC6O95255 1503 aa10.5□□□□□ -0.73
SCARB2-220ENST00000640076 RGPD1P0DJD0 1748 aa10.5□□□□□ -0.73
SCARB2-220ENST00000640076 PROCA1Q8NCQ7 364 aaPredicted RBP10.5□□□□□ -0.73
SCARB2-220ENST00000640076 TAF7LQ5H9L4 462 aa10.49□□□□□ -0.73
SCARB2-220ENST00000640076 AXIN2Q9Y2T1 843 aa10.49□□□□□ -0.73
SCARB2-220ENST00000640076 RGPD5Q99666 1765 aa10.49□□□□□ -0.73
SCARB2-220ENST00000640076 HNRNPUQ00839 825 aaKnown RBP eCLIP10.48□□□□□ -0.73
SCARB2-220ENST00000640076 PBXIP1Q96AQ6 731 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 IVNS1ABPQ9Y6Y0 642 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 CHRNA2Q15822 529 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 BANK1Q8NDB2 785 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 TSPYL2Q9H2G4 693 aaPredicted RBP10.48□□□□□ -0.73
SCARB2-220ENST00000640076 PRDM11Q9NQV5 511 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 SNRKQ9NRH2 765 aa10.48□□□□□ -0.73
SCARB2-220ENST00000640076 LMO7Q8WWI1 1683 aa10.47□□□□□ -0.73
SCARB2-220ENST00000640076 CCDC146Q8IYE0 955 aa10.47□□□□□ -0.73
SCARB2-220ENST00000640076 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
SCARB2-220ENST00000640076 JCADQ9P266 1359 aa10.47□□□□□ -0.73
SCARB2-220ENST00000640076 FCHSD2O94868 740 aa10.46□□□□□ -0.73
SCARB2-220ENST00000640076 HSPA1LP34931 641 aa10.46□□□□□ -0.73
SCARB2-220ENST00000640076 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
SCARB2-220ENST00000640076 EYA1Q99502 592 aa10.46□□□□□ -0.73
SCARB2-220ENST00000640076 IGSF1Q8N6C5 1336 aa10.46□□□□□ -0.73
SCARB2-220ENST00000640076 HMOX1P09601 288 aa10.46□□□□□ -0.74
SCARB2-220ENST00000640076 ANKRD24Q8TF21 1146 aa10.46□□□□□ -0.74
SCARB2-220ENST00000640076 RUNDC1Q96C34 613 aa10.46□□□□□ -0.74
SCARB2-220ENST00000640076 PLEKHF1Q96S99 279 aa10.46□□□□□ -0.74
SCARB2-220ENST00000640076 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.46□□□□□ -0.74
SCARB2-220ENST00000640076 CAMTA1Q9Y6Y1 1673 aa10.46□□□□□ -0.74
SCARB2-220ENST00000640076 ERBB3P21860 1342 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 RGPD2P0DJD1 1756 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 KDRP35968 1356 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 FAM83GA6ND36 823 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 SENP3-EIF4A1A0A087X0R7 540 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 PRKAR2BP31323 418 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 GLMNQ92990 594 aa10.45□□□□□ -0.74
SCARB2-220ENST00000640076 PNNQ9H307 717 aaKnown RBP10.45□□□□□ -0.74
SCARB2-220ENST00000640076 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
SCARB2-220ENST00000640076 APAF1O14727 1248 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 NBPF6Q5VWK0 638 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 NBPF4Q96M43 638 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 TMUB1Q9BVT8 246 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 NCAPD2Q15021 1401 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 ZBED9Q6R2W3 1325 aa10.44□□□□□ -0.74
SCARB2-220ENST00000640076 COL5A2P05997 1499 aaPredicted RBP10.44□□□□□ -0.74
SCARB2-220ENST00000640076 FAM208AQ9UK61 1670 aaKnown RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 RBM47A0AV96 593 aaKnown RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
SCARB2-220ENST00000640076 NUTM2BA6NNL0 878 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 NUTM2EB1AL46 878 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SCARB2-220ENST00000640076 NUTM2AQ8IVF1 878 aaPredicted RBP10.43□□□□□ -0.74
SCARB2-220ENST00000640076 TCP11L2Q8N4U5 519 aa10.43□□□□□ -0.74
SCARB2-220ENST00000640076 SPATA31A6Q5VVP1 1343 aa10.42□□□□□ -0.74
SCARB2-220ENST00000640076 MAPK8IP3Q9UPT6 1336 aa10.42□□□□□ -0.74
SCARB2-220ENST00000640076 TBC1D12O60347 775 aa10.42□□□□□ -0.74
SCARB2-220ENST00000640076 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
SCARB2-220ENST00000640076 USHBP1Q8N6Y0 703 aa10.42□□□□□ -0.74
SCARB2-220ENST00000640076 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms