RNA–Protein interactions for RNA: ENST00000639358.1

KCNQ3-207, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-207ENST00000639358 RTCBQ9Y3I0 505 aaKnown RBP18.49■□□□□ 0.55
KCNQ3-207ENST00000639358 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
KCNQ3-207ENST00000639358 TOGARAM1Q9Y4F4 1720 aa18.48■□□□□ 0.55
KCNQ3-207ENST00000639358 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
KCNQ3-207ENST00000639358 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
KCNQ3-207ENST00000639358 JMYQ8N9B5 988 aa18.47■□□□□ 0.55
KCNQ3-207ENST00000639358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.47■□□□□ 0.55
KCNQ3-207ENST00000639358 DPEP1P16444 411 aa18.46■□□□□ 0.55
KCNQ3-207ENST00000639358 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
KCNQ3-207ENST00000639358 IFNL2Q8IZJ0 200 aa18.46■□□□□ 0.55
KCNQ3-207ENST00000639358 PARP3Q9Y6F1 533 aa18.46■□□□□ 0.55
KCNQ3-207ENST00000639358 KDM2BQ8NHM5 1336 aa18.46■□□□□ 0.55
KCNQ3-207ENST00000639358 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
KCNQ3-207ENST00000639358 ADRA2BP18089 450 aa18.45■□□□□ 0.54
KCNQ3-207ENST00000639358 ATG3Q9NT62 314 aa18.45■□□□□ 0.54
KCNQ3-207ENST00000639358 ITGB4P16144 1822 aa18.44■□□□□ 0.54
KCNQ3-207ENST00000639358 PLEKHG2Q9H7P9 1386 aa18.44■□□□□ 0.54
KCNQ3-207ENST00000639358 CAPN15O75808 1086 aa18.44■□□□□ 0.54
KCNQ3-207ENST00000639358 RFC4P35249 363 aa18.44■□□□□ 0.54
KCNQ3-207ENST00000639358 EMILIN1Q9Y6C2 1016 aa18.44■□□□□ 0.54
KCNQ3-207ENST00000639358 C10orf71Q711Q0 1435 aa18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 HTRA3P83110 453 aa18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 TNS4Q8IZW8 715 aa18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 ARHGEF1Q92888 912 aaKnown RBP18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
KCNQ3-207ENST00000639358 PHKG2P15735 406 aa18.42■□□□□ 0.54
KCNQ3-207ENST00000639358 GYS1P13807 737 aa18.41■□□□□ 0.54
KCNQ3-207ENST00000639358 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
KCNQ3-207ENST00000639358 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
KCNQ3-207ENST00000639358 MAP2P11137 1827 aaKnown RBP18.41■□□□□ 0.54
KCNQ3-207ENST00000639358 KCNA3P22001 575 aa18.4■□□□□ 0.54
KCNQ3-207ENST00000639358 DALRD3Q5D0E6 543 aaKnown RBP18.4■□□□□ 0.54
KCNQ3-207ENST00000639358 EYA1Q99502 592 aa18.4■□□□□ 0.54
KCNQ3-207ENST00000639358 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
KCNQ3-207ENST00000639358 PKD1L3Q7Z443 1732 aa18.4■□□□□ 0.54
KCNQ3-207ENST00000639358 RPS6KA4O75676 772 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 PRELPP51888 382 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 RNF181Q9P0P0 153 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 WDR90Q96KV7 1748 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
KCNQ3-207ENST00000639358 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
KCNQ3-207ENST00000639358 KIF13BQ9NQT8 1826 aa18.38■□□□□ 0.53
KCNQ3-207ENST00000639358 ERVV-2B6SEH9 535 aa18.38■□□□□ 0.53
KCNQ3-207ENST00000639358 SMC1BQ8NDV3 1235 aa18.38■□□□□ 0.53
KCNQ3-207ENST00000639358 DCAF5Q96JK2 942 aa18.37■□□□□ 0.53
KCNQ3-207ENST00000639358 CNTNAP4Q9C0A0 1308 aa18.37■□□□□ 0.53
KCNQ3-207ENST00000639358 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
KCNQ3-207ENST00000639358 KIAA1551Q9HCM1 1747 aa18.35■□□□□ 0.53
KCNQ3-207ENST00000639358 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
KCNQ3-207ENST00000639358 KDRP35968 1356 aa18.35■□□□□ 0.53
KCNQ3-207ENST00000639358 SLC4A9Q96Q91 983 aa18.35■□□□□ 0.53
KCNQ3-207ENST00000639358 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
KCNQ3-207ENST00000639358 C4AP0C0L4 1744 aa18.33■□□□□ 0.52
KCNQ3-207ENST00000639358 CABP4P57796 275 aa18.32■□□□□ 0.52
KCNQ3-207ENST00000639358 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 ZC3H4Q9UPT8 1303 aaKnown RBP18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 VEGFAP15692 232 aaPredicted RBP18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 FKBP8Q14318 412 aa18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 PLEKHO1Q53GL0 409 aaPredicted RBP18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 POLKQ9UBT6 870 aa18.3■□□□□ 0.52
KCNQ3-207ENST00000639358 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 HSPA1AP0DMV8 641 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 HSPA1BP0DMV9 641 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 CHRNA5P30532 468 aa18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 ZEB1P37275 1124 aaPredicted RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 CRKLP46109 303 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 SRP68Q9UHB9 627 aaKnown RBP18.29■□□□□ 0.52
KCNQ3-207ENST00000639358 USP42Q9H9J4 1324 aaKnown RBP18.28■□□□□ 0.52
KCNQ3-207ENST00000639358 DDR1Q08345 913 aa18.28■□□□□ 0.52
KCNQ3-207ENST00000639358 ZNF831Q5JPB2 1677 aa18.28■□□□□ 0.52
KCNQ3-207ENST00000639358 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
KCNQ3-207ENST00000639358 GLTPD2A6NH11 291 aa18.27■□□□□ 0.52
KCNQ3-207ENST00000639358 ZPR1O75312 459 aa18.27■□□□□ 0.52
KCNQ3-207ENST00000639358 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
KCNQ3-207ENST00000639358 BRCA1P38398 1863 aaKnown RBP18.26■□□□□ 0.51
KCNQ3-207ENST00000639358 LMNB1P20700 586 aa18.26■□□□□ 0.51
KCNQ3-207ENST00000639358 MTHFSP49914 203 aa18.26■□□□□ 0.51
KCNQ3-207ENST00000639358 ZNF530Q6P9A1 599 aaPredicted RBP18.26■□□□□ 0.51
KCNQ3-207ENST00000639358 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
KCNQ3-207ENST00000639358 TM4SF1P30408 202 aa18.25■□□□□ 0.51
KCNQ3-207ENST00000639358 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
KCNQ3-207ENST00000639358 TNRC6CQ9HCJ0 1690 aaKnown RBP18.25■□□□□ 0.51
KCNQ3-207ENST00000639358 PCNTO95613 3336 aa18.24■□□□□ 0.51
KCNQ3-207ENST00000639358 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
KCNQ3-207ENST00000639358 RASSF7Q02833 373 aa18.24■□□□□ 0.51
KCNQ3-207ENST00000639358 NFATC2IPQ8NCF5 419 aa18.24■□□□□ 0.51
KCNQ3-207ENST00000639358 DPY19L2Q6NUT2 758 aa18.22■□□□□ 0.51
KCNQ3-207ENST00000639358 COL5A3P25940 1745 aaPredicted RBP18.21■□□□□ 0.51
KCNQ3-207ENST00000639358 ANKRD26Q9UPS8 1709 aa18.21■□□□□ 0.51
KCNQ3-207ENST00000639358 USPL1Q5W0Q7 1092 aa18.21■□□□□ 0.51
KCNQ3-207ENST00000639358 TTLL6Q8N841 843 aa18.21■□□□□ 0.51
KCNQ3-207ENST00000639358 INTS5Q6P9B9 1019 aaKnown RBP18.2■□□□□ 0.5
KCNQ3-207ENST00000639358 KDM6AO15550 1401 aaPredicted RBP18.2■□□□□ 0.5
KCNQ3-207ENST00000639358 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
KCNQ3-207ENST00000639358 H0YIN7 160 aa18.17■□□□□ 0.5
KCNQ3-207ENST00000639358 NFIXQ14938 502 aa18.17■□□□□ 0.5
KCNQ3-207ENST00000639358 SBF1O95248 1867 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms