RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 ACDQ96AP0 544 aa6.81□□□□□ -1.32
ATM-228ENST00000639240 GDF11O95390 407 aa6.8□□□□□ -1.32
ATM-228ENST00000639240 ZSCAN10Q96SZ4 725 aaPredicted RBP6.8□□□□□ -1.32
ATM-228ENST00000639240 GPAMQ9HCL2 828 aa6.8□□□□□ -1.32
ATM-228ENST00000639240 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
ATM-228ENST00000639240 DOLKQ9UPQ8 538 aa6.8□□□□□ -1.32
ATM-228ENST00000639240 H7C1W4 665 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 PIK3CDO00329 1044 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 MYCP01106 439 aaPredicted RBP6.79□□□□□ -1.32
ATM-228ENST00000639240 IRS1P35568 1242 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 FLIIQ13045 1269 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 OXLD1Q5BKU9 147 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
ATM-228ENST00000639240 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 TMEM151AQ8N4L1 468 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
ATM-228ENST00000639240 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
ATM-228ENST00000639240 USP4Q13107 963 aa6.78□□□□□ -1.32
ATM-228ENST00000639240 SLFNL1Q499Z3 407 aa6.78□□□□□ -1.32
ATM-228ENST00000639240 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
ATM-228ENST00000639240 POM121Q96HA1 1249 aa6.78□□□□□ -1.32
ATM-228ENST00000639240 ESF1Q9H501 851 aaKnown RBP6.78□□□□□ -1.32
ATM-228ENST00000639240 COG6Q9Y2V7 657 aa6.78□□□□□ -1.32
ATM-228ENST00000639240 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
ATM-228ENST00000639240 MSX1P28360 303 aa6.77□□□□□ -1.33
ATM-228ENST00000639240 PPARGC1BQ86YN6 1023 aaKnown RBP6.77□□□□□ -1.33
ATM-228ENST00000639240 PLPP7Q8NBV4 271 aa6.77□□□□□ -1.33
ATM-228ENST00000639240 RUBCNLQ9H714 662 aa6.77□□□□□ -1.33
ATM-228ENST00000639240 USP3Q9Y6I4 520 aa6.77□□□□□ -1.33
ATM-228ENST00000639240 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
ATM-228ENST00000639240 C2CD2LO14523 706 aa6.76□□□□□ -1.33
ATM-228ENST00000639240 A0A1B0GTH6 734 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 ITGB2P05107 769 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 INHAP05111 366 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 BCRP11274 1271 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 UBTFP17480 764 aaKnown RBP6.75□□□□□ -1.33
ATM-228ENST00000639240 MX2P20592 715 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 MARSP56192 900 aaKnown RBP6.75□□□□□ -1.33
ATM-228ENST00000639240 TMEM214Q6NUQ4 689 aaKnown RBP6.75□□□□□ -1.33
ATM-228ENST00000639240 FOXR1Q6PIV2 292 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 NDFIP2Q9NV92 336 aa6.75□□□□□ -1.33
ATM-228ENST00000639240 RAD21O60216 631 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 GDF10P55107 478 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 TLR1Q15399 786 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 ESCO1Q5FWF5 840 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 TRERF1Q96PN7 1200 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 CFHR5Q9BXR6 569 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 ALG2Q9H553 416 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 DNAAF2Q9NVR5 837 aaKnown RBP6.74□□□□□ -1.33
ATM-228ENST00000639240 PCDHGA11Q9Y5H2 935 aa6.74□□□□□ -1.33
ATM-228ENST00000639240 SHISA8B8ZZ34 492 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
ATM-228ENST00000639240 BNIP3LO60238 219 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 ATP4AP20648 1035 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 MAP3K10Q02779 954 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 GNASQ5JWF2 1037 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 KLRG1Q96E93 195 aa6.73□□□□□ -1.33
ATM-228ENST00000639240 IQSEC3Q9UPP2 1182 aaPredicted RBP6.73□□□□□ -1.33
ATM-228ENST00000639240 OIP5O43482 229 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SMTNP53814 917 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SNRPNP63162 240 aaKnown RBP6.72□□□□□ -1.33
ATM-228ENST00000639240 CTBSQ01459 385 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SEMA3FQ13275 785 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 MAP7D1Q3KQU3 841 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 ADAMTS19Q8TE59 1207 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SCARF2Q96GP6 870 aaPredicted RBP6.72□□□□□ -1.33
ATM-228ENST00000639240 ABHD17AQ96GS6 310 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SLC4A9Q96Q91 983 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 GTF3C3Q9Y5Q9 886 aa6.72□□□□□ -1.33
ATM-228ENST00000639240 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
ATM-228ENST00000639240 OXCT2Q9BYC2 517 aaPredicted RBP6.71□□□□□ -1.34
ATM-228ENST00000639240 CRISPLD1Q9H336 500 aa6.71□□□□□ -1.34
ATM-228ENST00000639240 DNMT3AQ9Y6K1 912 aaPredicted RBP6.71□□□□□ -1.34
ATM-228ENST00000639240 POM121CA8CG34 1229 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 MTFR1Q15390 333 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 KANK3Q6NY19 840 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 CLUAP1Q96AJ1 413 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 SIRT1Q96EB6 747 aa6.7□□□□□ -1.34
ATM-228ENST00000639240 SOX11P35716 441 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 LBRQ14739 615 aaKnown RBP6.69□□□□□ -1.34
ATM-228ENST00000639240 GPAT2Q6NUI2 795 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 NEDD1Q8NHV4 660 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 DCAF5Q96JK2 942 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 ZCCHC2Q9C0B9 1178 aaKnown RBP6.69□□□□□ -1.34
ATM-228ENST00000639240 ENAMQ9NRM1 1142 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 LRRC4BQ9NT99 713 aa6.69□□□□□ -1.34
ATM-228ENST00000639240 A6NJY4 79 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 SKIP12755 728 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 MAP2K3P46734 347 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 WWC1Q8IX03 1113 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 GALNT6Q8NCL4 622 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 KLF15Q9UIH9 416 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 ATXN7L1Q9ULK2 861 aaPredicted RBP6.68□□□□□ -1.34
ATM-228ENST00000639240 PARP3Q9Y6F1 533 aa6.68□□□□□ -1.34
ATM-228ENST00000639240 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms