RNA–Protein interactions for RNA: ENST00000638629.1

PAX6-235, Transcript of paired box 6, humanhuman

TSL 2 BASIC

Gene PAX6, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-235ENST00000638629 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.3
PAX6-235ENST00000638629 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
PAX6-235ENST00000638629 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
PAX6-235ENST00000638629 SPG7Q9UQ90 795 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
PAX6-235ENST00000638629 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 PCDHB15Q9Y5E8 787 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 MEGF6O75095 1541 aa13.2□□□□□ -0.3
PAX6-235ENST00000638629 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
PAX6-235ENST00000638629 TEFQ10587 303 aa13.19□□□□□ -0.3
PAX6-235ENST00000638629 EVA1CP58658 441 aa13.19□□□□□ -0.3
PAX6-235ENST00000638629 PIP4K2BP78356 416 aa13.19□□□□□ -0.3
PAX6-235ENST00000638629 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
PAX6-235ENST00000638629 SEC24BO95487 1268 aa13.18□□□□□ -0.3
PAX6-235ENST00000638629 PLEKHG2Q9H7P9 1386 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 PHKG2P15735 406 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 BTBD11A6QL63 1104 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 LARP1Q6PKG0 1096 aaKnown RBP13.17□□□□□ -0.3
PAX6-235ENST00000638629 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
PAX6-235ENST00000638629 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
PAX6-235ENST00000638629 HDAC1Q13547 482 aaPredicted RBP13.16□□□□□ -0.3
PAX6-235ENST00000638629 DDX19BQ9UMR2 479 aa13.16□□□□□ -0.3
PAX6-235ENST00000638629 COL22A1Q8NFW1 1626 aaPredicted RBP13.16□□□□□ -0.3
PAX6-235ENST00000638629 PHLPP1O60346 1717 aa13.16□□□□□ -0.3
PAX6-235ENST00000638629 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
PAX6-235ENST00000638629 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
PAX6-235ENST00000638629 UBAP1LF5GYI3 381 aa13.15□□□□□ -0.3
PAX6-235ENST00000638629 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
PAX6-235ENST00000638629 KCNQ3O43525 872 aa13.15□□□□□ -0.3
PAX6-235ENST00000638629 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
PAX6-235ENST00000638629 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
PAX6-235ENST00000638629 CYP27B1O15528 508 aa13.14□□□□□ -0.31
PAX6-235ENST00000638629 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
PAX6-235ENST00000638629 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
PAX6-235ENST00000638629 ADAMTS7Q9UKP4 1686 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 IL2RBP14784 551 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
PAX6-235ENST00000638629 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 ABCC4O15439 1325 aa13.13□□□□□ -0.31
PAX6-235ENST00000638629 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
PAX6-235ENST00000638629 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
PAX6-235ENST00000638629 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
PAX6-235ENST00000638629 COL14A1Q05707 1796 aaKnown RBP13.12□□□□□ -0.31
PAX6-235ENST00000638629 PTPRCP08575 1304 aa13.12□□□□□ -0.31
PAX6-235ENST00000638629 NECTIN2Q92692 538 aa13.12□□□□□ -0.31
PAX6-235ENST00000638629 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
PAX6-235ENST00000638629 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
PAX6-235ENST00000638629 G2E3Q7L622 706 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 TBC1D2Q9BYX2 928 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
PAX6-235ENST00000638629 SCN11AQ9UI33 1791 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 ADAMTS2O95450 1211 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 HOXB7P09629 217 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 ZBTB40Q9NUA8 1239 aa13.11□□□□□ -0.31
PAX6-235ENST00000638629 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
PAX6-235ENST00000638629 PCDH11XQ9BZA7 1347 aa13.1□□□□□ -0.31
PAX6-235ENST00000638629 PCDH11YQ9BZA8 1340 aa13.1□□□□□ -0.31
PAX6-235ENST00000638629 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
PAX6-235ENST00000638629 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
PAX6-235ENST00000638629 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
PAX6-235ENST00000638629 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
PAX6-235ENST00000638629 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 EIF2S2P20042 333 aaKnown RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 L1TD1Q5T7N2 865 aaKnown RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 CHMP4BQ9H444 224 aaKnown RBP13.09□□□□□ -0.31
PAX6-235ENST00000638629 RGS12O14924 1447 aa13.09□□□□□ -0.31
PAX6-235ENST00000638629 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
PAX6-235ENST00000638629 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.31
PAX6-235ENST00000638629 CABP4P57796 275 aa13.08□□□□□ -0.32
PAX6-235ENST00000638629 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
PAX6-235ENST00000638629 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.32
PAX6-235ENST00000638629 HEG1Q9ULI3 1381 aa13.08□□□□□ -0.32
PAX6-235ENST00000638629 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
PAX6-235ENST00000638629 FLIIQ13045 1269 aa13.08□□□□□ -0.32
PAX6-235ENST00000638629 ZNF790Q6PG37 636 aa13.08□□□□□ -0.32
PAX6-235ENST00000638629 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
PAX6-235ENST00000638629 CERKQ8TCT0 537 aa13.07□□□□□ -0.32
PAX6-235ENST00000638629 RTN4Q9NQC3 1192 aaKnown RBP13.07□□□□□ -0.32
PAX6-235ENST00000638629 CACNA1FO60840 1977 aa13.06□□□□□ -0.32
PAX6-235ENST00000638629 MRC1P22897 1456 aa13.06□□□□□ -0.32
PAX6-235ENST00000638629 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
PAX6-235ENST00000638629 SLKQ9H2G2 1235 aaPredicted RBP13.06□□□□□ -0.32
PAX6-235ENST00000638629 F6X3S4 739 aa13.06□□□□□ -0.32
PAX6-235ENST00000638629 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
PAX6-235ENST00000638629 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
PAX6-235ENST00000638629 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
PAX6-235ENST00000638629 PRAMEF22A3QJZ6 481 aa13.05□□□□□ -0.32
PAX6-235ENST00000638629 PHAXQ9H814 394 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms