RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	LINC00116	Q8NCU8	138 aa		13.01	□□□□□ -0.33
CACNA1A-256	ENST00000637981	EMILIN1	Q9Y6C2	1016 aa		13.01	□□□□□ -0.33
CACNA1A-256	ENST00000637981	MAP2	P11137	1827 aa	Known RBP	13	□□□□□ -0.33
CACNA1A-256	ENST00000637981	PPM1G	O15355	546 aa	Predicted RBP	13	□□□□□ -0.33
CACNA1A-256	ENST00000637981	SPG7	Q9UQ90	795 aa		13	□□□□□ -0.33
CACNA1A-256	ENST00000637981	NCAPD2	Q15021	1401 aa		12.99	□□□□□ -0.33
CACNA1A-256	ENST00000637981	GNPAT	O15228	680 aa		12.99	□□□□□ -0.33
CACNA1A-256	ENST00000637981	TMOD3	Q9NYL9	352 aa		12.99	□□□□□ -0.33
CACNA1A-256	ENST00000637981	KIF3C	O14782	793 aa		12.98	□□□□□ -0.33
CACNA1A-256	ENST00000637981	ATP6V1A	P38606	617 aa		12.98	□□□□□ -0.33
CACNA1A-256	ENST00000637981	ITPK1	Q13572	414 aa		12.98	□□□□□ -0.33
CACNA1A-256	ENST00000637981	ASAP1	Q9ULH1	1129 aa		12.98	□□□□□ -0.33
CACNA1A-256	ENST00000637981	MMP10	P09238	476 aa		12.97	□□□□□ -0.33
CACNA1A-256	ENST00000637981	CARD14	Q9BXL6	1004 aa		12.97	□□□□□ -0.33
CACNA1A-256	ENST00000637981	CIC	Q96RK0	1608 aa	Predicted RBP	12.97	□□□□□ -0.33
CACNA1A-256	ENST00000637981	EYA1	Q99502	592 aa		12.96	□□□□□ -0.33
CACNA1A-256	ENST00000637981	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.96	□□□□□ -0.33
CACNA1A-256	ENST00000637981	PXDNL	A1KZ92	1463 aa		12.96	□□□□□ -0.33
CACNA1A-256	ENST00000637981	PHKG2	P15735	406 aa		12.95	□□□□□ -0.34
CACNA1A-256	ENST00000637981	IFNL2	Q8IZJ0	200 aa		12.95	□□□□□ -0.34
CACNA1A-256	ENST00000637981	ATG3	Q9NT62	314 aa		12.95	□□□□□ -0.34
CACNA1A-256	ENST00000637981	WASHC2A	Q641Q2	1341 aa		12.94	□□□□□ -0.34
CACNA1A-256	ENST00000637981	TGFB2	P61812	414 aa		12.94	□□□□□ -0.34
CACNA1A-256	ENST00000637981	BCS1L	Q9Y276	419 aa		12.94	□□□□□ -0.34
CACNA1A-256	ENST00000637981	RTCB	Q9Y3I0	505 aa	Known RBP	12.94	□□□□□ -0.34
CACNA1A-256	ENST00000637981	KIF13B	Q9NQT8	1826 aa		12.94	□□□□□ -0.34
CACNA1A-256	ENST00000637981		A0A0G2JLW4	131 aa		12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	APLP1	P51693	650 aa		12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	TRAPPC3L	Q5T215	181 aa		12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	POLR3GL	Q9BT43	218 aa		12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	KIAA1551	Q9HCM1	1747 aa		12.93	□□□□□ -0.34
CACNA1A-256	ENST00000637981	NLGN1	Q8N2Q7	840 aa		12.92	□□□□□ -0.34
CACNA1A-256	ENST00000637981	KDR	P35968	1356 aa		12.92	□□□□□ -0.34
CACNA1A-256	ENST00000637981	C10orf71	Q711Q0	1435 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	TOMM70	O94826	608 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	ARHGAP27	Q6ZUM4	889 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	RBM42	Q9BTD8	480 aa	Known RBP	12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	CCDC87	Q9NVE4	849 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	POLK	Q9UBT6	870 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	KIF7	Q2M1P5	1343 aa		12.91	□□□□□ -0.34
CACNA1A-256	ENST00000637981	FCHSD2	O94868	740 aa		12.9	□□□□□ -0.34
CACNA1A-256	ENST00000637981	DPEP1	P16444	411 aa		12.9	□□□□□ -0.34
CACNA1A-256	ENST00000637981	ARHGEF1	Q92888	912 aa	Known RBP	12.9	□□□□□ -0.34
CACNA1A-256	ENST00000637981	SLC4A9	Q96Q91	983 aa		12.9	□□□□□ -0.34
CACNA1A-256	ENST00000637981	C4A	P0C0L4	1744 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	ERVV-2	B6SEH9	535 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	GYS1	P13807	737 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	RFC4	P35249	363 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	EIF4A2	Q14240	407 aa	Known RBP	12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	RC3H1	Q5TC82	1133 aa	Known RBP	12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	NMRK2	Q9NPI5	230 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PARP3	Q9Y6F1	533 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	ZNF831	Q5JPB2	1677 aa		12.89	□□□□□ -0.35
CACNA1A-256	ENST00000637981	TNNT2	P45379	298 aa	Predicted RBP	12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	DNAJC5G	Q8N7S2	189 aa		12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PLEKHG2	Q9H7P9	1386 aa		12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	COL5A3	P25940	1745 aa	Predicted RBP	12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	CNTNAP4	Q9C0A0	1308 aa		12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	RPS6KA4	O75676	772 aa		12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	HSP90AB1	P08238	724 aa	Known RBP	12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	DCAF5	Q96JK2	942 aa		12.88	□□□□□ -0.35
CACNA1A-256	ENST00000637981	BRCA1	P38398	1863 aa	Known RBP	12.87	□□□□□ -0.35
CACNA1A-256	ENST00000637981	KCNA3	P22001	575 aa		12.87	□□□□□ -0.35
CACNA1A-256	ENST00000637981	C9orf131	Q5VYM1	1079 aa		12.87	□□□□□ -0.35
CACNA1A-256	ENST00000637981	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA1A-256	ENST00000637981	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1A-256	ENST00000637981	CABP4	P57796	275 aa		12.86	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA1A-256	ENST00000637981	RBM46	Q8TBY0	533 aa	Known RBP	12.86	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PIM2	Q9P1W9	311 aa		12.86	□□□□□ -0.35
CACNA1A-256	ENST00000637981	KDM6A	O15550	1401 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PTCD1	O75127	700 aa	Known RBP	12.85	□□□□□ -0.35
CACNA1A-256	ENST00000637981	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.85	□□□□□ -0.35
CACNA1A-256	ENST00000637981	WDR90	Q96KV7	1748 aa		12.85	□□□□□ -0.35
CACNA1A-256	ENST00000637981	ARFGEF1	Q9Y6D6	1849 aa		12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	CRKL	P46109	303 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	AMOT	Q4VCS5	1084 aa		12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	DALRD3	Q5D0E6	543 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	PANK3	Q9H999	370 aa		12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	SRP68	Q9UHB9	627 aa	Known RBP	12.84	□□□□□ -0.35
CACNA1A-256	ENST00000637981	MYH14	Q7Z406	1995 aa	Known RBP	12.83	□□□□□ -0.35
CACNA1A-256	ENST00000637981	MTHFS	P49914	203 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	HTRA3	P83110	453 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	FSTL1	Q12841	308 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	FKBP8	Q14318	412 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	RNF181	Q9P0P0	153 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	KNSTRN	Q9Y448	316 aa		12.83	□□□□□ -0.36
CACNA1A-256	ENST00000637981	KDM2B	Q8NHM5	1336 aa		12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	KCP	Q6ZWJ8	1503 aa		12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	DDR1	Q08345	913 aa		12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	C1orf141	Q5JVX7	400 aa		12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	KLRG1	Q96E93	195 aa		12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	USP42	Q9H9J4	1324 aa	Known RBP	12.82	□□□□□ -0.36
CACNA1A-256	ENST00000637981	CHRNA5	P30532	468 aa		12.81	□□□□□ -0.36
CACNA1A-256	ENST00000637981	NFATC2IP	Q8NCF5	419 aa		12.81	□□□□□ -0.36
CACNA1A-256	ENST00000637981	RRAGC	Q9HB90	399 aa		12.81	□□□□□ -0.36
CACNA1A-256	ENST00000637981	AEBP1	Q8IUX7	1158 aa		12.8	□□□□□ -0.36
CACNA1A-256	ENST00000637981	TJP1	Q07157	1748 aa		12.8	□□□□□ -0.36
CACNA1A-256	ENST00000637981	POLRMT	O00411	1230 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms