RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 SPATA31A5Q5VU36 1347 aa21.6■■□□□ 1.05
CLCN2-220ENST00000637538 SPATA31A7Q8IWB4 1347 aa21.6■■□□□ 1.05
CLCN2-220ENST00000637538 PLIN1O60240 522 aa21.59■■□□□ 1.05
CLCN2-220ENST00000637538 NKX1-1Q15270 411 aaPredicted RBP21.59■■□□□ 1.05
CLCN2-220ENST00000637538 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
CLCN2-220ENST00000637538 DCAF5Q96JK2 942 aa21.59■■□□□ 1.05
CLCN2-220ENST00000637538 USP35Q9P2H5 1018 aa21.59■■□□□ 1.05
CLCN2-220ENST00000637538 THRAP3Q9Y2W1 955 aaKnown RBP21.59■■□□□ 1.05
CLCN2-220ENST00000637538 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.04
CLCN2-220ENST00000637538 TWISTNBQ3B726 338 aaPredicted RBP21.58■■□□□ 1.04
CLCN2-220ENST00000637538 ALDH1L2Q3SY69 923 aa21.57■■□□□ 1.04
CLCN2-220ENST00000637538 SSH1Q8WYL5 1049 aa21.57■■□□□ 1.04
CLCN2-220ENST00000637538 TEFQ10587 303 aa21.56■■□□□ 1.04
CLCN2-220ENST00000637538 KRT24Q2M2I5 525 aa21.56■■□□□ 1.04
CLCN2-220ENST00000637538 BRPF1P55201 1214 aaPredicted RBP21.55■■□□□ 1.04
CLCN2-220ENST00000637538 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.55■■□□□ 1.04
CLCN2-220ENST00000637538 CDCA7Q9BWT1 371 aaPredicted RBP21.55■■□□□ 1.04
CLCN2-220ENST00000637538 SLC52A2Q9HAB3 445 aa21.55■■□□□ 1.04
CLCN2-220ENST00000637538 TNS2Q63HR2 1409 aa21.54■■□□□ 1.04
CLCN2-220ENST00000637538 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
CLCN2-220ENST00000637538 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
CLCN2-220ENST00000637538 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
CLCN2-220ENST00000637538 TOGARAM1Q9Y4F4 1720 aa21.52■■□□□ 1.04
CLCN2-220ENST00000637538 BTBD11A6QL63 1104 aa21.52■■□□□ 1.04
CLCN2-220ENST00000637538 ELL2O00472 640 aaPredicted RBP21.52■■□□□ 1.04
CLCN2-220ENST00000637538 C20orf194Q5TEA3 1177 aa21.52■■□□□ 1.04
CLCN2-220ENST00000637538 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
CLCN2-220ENST00000637538 RGS12O14924 1447 aa21.51■■□□□ 1.03
CLCN2-220ENST00000637538 HEG1Q9ULI3 1381 aa21.51■■□□□ 1.03
CLCN2-220ENST00000637538 ONECUT3O60422 494 aaPredicted RBP21.51■■□□□ 1.03
CLCN2-220ENST00000637538 EIF4A1P60842 406 aaKnown RBP21.51■■□□□ 1.03
CLCN2-220ENST00000637538 CCDC9Q9Y3X0 531 aaKnown RBP21.51■■□□□ 1.03
CLCN2-220ENST00000637538 MRPL50Q8N5N7 158 aaKnown RBP21.5■■□□□ 1.03
CLCN2-220ENST00000637538 KCNQ3O43525 872 aa21.5■■□□□ 1.03
CLCN2-220ENST00000637538 PDE3AQ14432 1141 aa21.5■■□□□ 1.03
CLCN2-220ENST00000637538 ERVV-2B6SEH9 535 aa21.49■■□□□ 1.03
CLCN2-220ENST00000637538 DDX54Q8TDD1 881 aaKnown RBP21.49■■□□□ 1.03
CLCN2-220ENST00000637538 GLI3P10071 1580 aa21.48■■□□□ 1.03
CLCN2-220ENST00000637538 EXOC5O00471 708 aa21.48■■□□□ 1.03
CLCN2-220ENST00000637538 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
CLCN2-220ENST00000637538 PAPPAQ13219 1627 aa21.48■■□□□ 1.03
CLCN2-220ENST00000637538 KIF16BQ96L93 1317 aa21.47■■□□□ 1.03
CLCN2-220ENST00000637538 HOXB7P09629 217 aa21.46■■□□□ 1.03
CLCN2-220ENST00000637538 FRAT1Q92837 279 aaPredicted RBP21.46■■□□□ 1.03
CLCN2-220ENST00000637538 ZKSCAN2Q63HK3 967 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 EXOC6Q8TAG9 804 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 THSD7AQ9UPZ6 1657 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 CABP4P57796 275 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 ZNF790Q6PG37 636 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
CLCN2-220ENST00000637538 NOB1Q9ULX3 412 aaKnown RBP21.45■■□□□ 1.02
CLCN2-220ENST00000637538 ARHGAP45Q92619 1136 aa21.44■■□□□ 1.02
CLCN2-220ENST00000637538 TNNQ9UQP3 1299 aa21.44■■□□□ 1.02
CLCN2-220ENST00000637538 UBR2Q8IWV8 1755 aa21.43■■□□□ 1.02
CLCN2-220ENST00000637538 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
CLCN2-220ENST00000637538 DDB1Q16531 1140 aa21.43■■□□□ 1.02
CLCN2-220ENST00000637538 ATF7IPQ6VMQ6 1270 aa21.43■■□□□ 1.02
CLCN2-220ENST00000637538 SEPT12Q8IYM1 358 aa21.43■■□□□ 1.02
CLCN2-220ENST00000637538 PPP4R2Q9NY27 417 aa21.43■■□□□ 1.02
CLCN2-220ENST00000637538 TCERG1O14776 1098 aaKnown RBP21.42■■□□□ 1.02
CLCN2-220ENST00000637538 RLBP1P12271 317 aa21.42■■□□□ 1.02
CLCN2-220ENST00000637538 TRIM27P14373 513 aa21.42■■□□□ 1.02
CLCN2-220ENST00000637538 SLC39A6Q13433 755 aa21.42■■□□□ 1.02
CLCN2-220ENST00000637538 FAM98CQ17RN3 349 aaKnown RBP21.42■■□□□ 1.02
CLCN2-220ENST00000637538 ITGB4P16144 1822 aa21.42■■□□□ 1.02
CLCN2-220ENST00000637538 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
CLCN2-220ENST00000637538 GIGYF1O75420 1035 aaPredicted RBP21.41■■□□□ 1.02
CLCN2-220ENST00000637538 CACNA1FO60840 1977 aa21.41■■□□□ 1.02
CLCN2-220ENST00000637538 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
CLCN2-220ENST00000637538 C5P01031 1676 aa21.4■■□□□ 1.02
CLCN2-220ENST00000637538 KCPQ6ZWJ8 1503 aa21.4■■□□□ 1.02
CLCN2-220ENST00000637538 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.02
CLCN2-220ENST00000637538 MARCH10Q8NA82 808 aaPredicted RBP21.39■■□□□ 1.02
CLCN2-220ENST00000637538 DOT1LQ8TEK3 1739 aa21.39■■□□□ 1.02
CLCN2-220ENST00000637538 MS4A1P11836 297 aa21.39■■□□□ 1.01
CLCN2-220ENST00000637538 DZIP1LQ8IYY4 767 aaKnown RBP21.39■■□□□ 1.01
CLCN2-220ENST00000637538 ZNF496Q96IT1 587 aaPredicted RBP21.38■■□□□ 1.01
CLCN2-220ENST00000637538 BCL9O00512 1426 aa21.37■■□□□ 1.01
CLCN2-220ENST00000637538 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
CLCN2-220ENST00000637538 SLC4A2P04920 1241 aa21.36■■□□□ 1.01
CLCN2-220ENST00000637538 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
CLCN2-220ENST00000637538 ABCC4O15439 1325 aa21.36■■□□□ 1.01
CLCN2-220ENST00000637538 TTC5Q8N0Z6 440 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 PIGBQ92521 554 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 UPF1Q92900 1129 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLCN2-220ENST00000637538 CLUAP1Q96AJ1 413 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 TMOD3Q9NYL9 352 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 COG6Q9Y2V7 657 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 PTPRCP08575 1304 aa21.35■■□□□ 1.01
CLCN2-220ENST00000637538 A0A0G2JS52 829 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 PRAMEF22A3QJZ6 481 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 MYT1Q01538 1121 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 KRT27Q7Z3Y8 459 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 STK31Q9BXU1 1019 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 LAMB4A4D0S4 1761 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
CLCN2-220ENST00000637538 G2E3Q7L622 706 aa21.34■■□□□ 1.01
CLCN2-220ENST00000637538 FTSJ3Q8IY81 847 aaKnown RBP21.34■■□□□ 1.01
CLCN2-220ENST00000637538 API5Q9BZZ5 524 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms