RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 EYA1Q99502 592 aa10.12□□□□□ -0.79
SYNGAP1-219ENST00000637052 KIF20BQ96Q89 1820 aa10.12□□□□□ -0.79
SYNGAP1-219ENST00000637052 PPM1GO15355 546 aaPredicted RBP10.11□□□□□ -0.79
SYNGAP1-219ENST00000637052 HMGB2P26583 209 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-219ENST00000637052 TGFB2P61812 414 aa10.11□□□□□ -0.79
SYNGAP1-219ENST00000637052 ARHGEF1Q92888 912 aaKnown RBP10.11□□□□□ -0.79
SYNGAP1-219ENST00000637052 TMOD3Q9NYL9 352 aa10.11□□□□□ -0.79
SYNGAP1-219ENST00000637052 BRCA1P38398 1863 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 FCHSD2O94868 740 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 PHKG2P15735 406 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 TMF1P82094 1093 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 TRAPPC3LQ5T215 181 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 C9orf131Q5VYM1 1079 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 TONSLQ96HA7 1378 aa10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 MYH14Q7Z406 1995 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-219ENST00000637052 PCNTO95613 3336 aa10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 CAPN15O75808 1086 aa10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 GYS1P13807 737 aa10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 RBM42Q9BTD8 480 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
SYNGAP1-219ENST00000637052 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 IFNL2Q8IZJ0 200 aa10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 NLGN1Q8N2Q7 840 aa10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 RBM46Q8TBY0 533 aaKnown RBP10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 RRAGCQ9HB90 399 aa10.08□□□□□ -0.8
SYNGAP1-219ENST00000637052 WASHC2AQ641Q2 1341 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 SBF1O95248 1867 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 KDRP35968 1356 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 KIF24Q5T7B8 1368 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 JMYQ8N9B5 988 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 CCDC87Q9NVE4 849 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 KCPQ6ZWJ8 1503 aa10.07□□□□□ -0.8
SYNGAP1-219ENST00000637052 RPS6KA4O75676 772 aa10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 CHRNA5P30532 468 aa10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 RFC4P35249 363 aa10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 RC3H1Q5TC82 1133 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 POLKQ9UBT6 870 aa10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 PARP3Q9Y6F1 533 aa10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 COL5A3P25940 1745 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-219ENST00000637052 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 DDR1Q08345 913 aa10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 EIF4A2Q14240 407 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 FKBP8Q14318 412 aa10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 C16orf71Q8IYS4 520 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 DCAF5Q96JK2 942 aa10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 RNF181Q9P0P0 153 aa10.05□□□□□ -0.8
SYNGAP1-219ENST00000637052 ANKRD26Q9UPS8 1709 aa10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 TNNT2P45379 298 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 PRELPP51888 382 aa10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 FSTL1Q12841 308 aa10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 PIM2Q9P1W9 311 aa10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 CNTNAP4Q9C0A0 1308 aa10.04□□□□□ -0.8
SYNGAP1-219ENST00000637052 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
SYNGAP1-219ENST00000637052 PTCD1O75127 700 aaKnown RBP10.03□□□□□ -0.8
SYNGAP1-219ENST00000637052 ADRA2BP18089 450 aa10.03□□□□□ -0.8
SYNGAP1-219ENST00000637052 RASSF7Q02833 373 aa10.03□□□□□ -0.8
SYNGAP1-219ENST00000637052 DALRD3Q5D0E6 543 aaKnown RBP10.03□□□□□ -0.8
SYNGAP1-219ENST00000637052 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
SYNGAP1-219ENST00000637052 KDM6AO15550 1401 aaPredicted RBP10.02□□□□□ -0.81
SYNGAP1-219ENST00000637052 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.81
SYNGAP1-219ENST00000637052 TNS4Q8IZW8 715 aa10.02□□□□□ -0.81
SYNGAP1-219ENST00000637052 CCDC88AQ3V6T2 1871 aa10.02□□□□□ -0.81
SYNGAP1-219ENST00000637052 POLRMTO00411 1230 aaKnown RBP10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 TM4SF1P30408 202 aa10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 CABP4P57796 275 aa10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 INTS5Q6P9B9 1019 aaKnown RBP10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 PLEKHG2Q9H7P9 1386 aa10.01□□□□□ -0.81
SYNGAP1-219ENST00000637052 ZNF530Q6P9A1 599 aaPredicted RBP10□□□□□ -0.81
SYNGAP1-219ENST00000637052 NFATC2IPQ8NCF5 419 aa10□□□□□ -0.81
SYNGAP1-219ENST00000637052 USP42Q9H9J4 1324 aaKnown RBP10□□□□□ -0.81
SYNGAP1-219ENST00000637052 AFDNP55196 1824 aaKnown RBP10□□□□□ -0.81
SYNGAP1-219ENST00000637052 ADAMTS7Q9UKP4 1686 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 TJP1Q07157 1748 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 HSPA1AP0DMV8 641 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 HSPA1BP0DMV9 641 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 MTHFSP49914 203 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 PLEKHO1Q53GL0 409 aaPredicted RBP9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 CDCA8Q53HL2 280 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 USPL1Q5W0Q7 1092 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 AEBP1Q8IUX7 1158 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
SYNGAP1-219ENST00000637052 POTECB2RU33 542 aa9.98□□□□□ -0.81
SYNGAP1-219ENST00000637052 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
SYNGAP1-219ENST00000637052 DNAJC10Q8IXB1 793 aa9.98□□□□□ -0.81
SYNGAP1-219ENST00000637052 GLTPD2A6NH11 291 aa9.97□□□□□ -0.81
SYNGAP1-219ENST00000637052 POLR3GLQ9BT43 218 aa9.97□□□□□ -0.81
SYNGAP1-219ENST00000637052 VEGFAP15692 232 aaPredicted RBP9.96□□□□□ -0.82
SYNGAP1-219ENST00000637052 NFIXQ14938 502 aa9.96□□□□□ -0.82
SYNGAP1-219ENST00000637052 BCL2L12Q9HB09 334 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms