RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 SPACA7Q96KW9 195 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 ZSWIM6Q9HCJ5 1215 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 NLRP2Q9NX02 1062 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
SMARCA2-250ENST00000636367 CUX1P39880 1505 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 PSEN2P49810 448 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 PDE3BQ13370 1112 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 PCDHGB7Q9Y5F8 929 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 GPR182O15218 404 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 NPR3P17342 541 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 TCEAL1Q15170 157 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 BRICD5Q6PL45 260 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 ZBTB33Q86T24 672 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 VTI1AQ96AJ9 217 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 CARD14Q9BXL6 1004 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 RABGEF1Q9UJ41 708 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
SMARCA2-250ENST00000636367 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 ZNF394Q53GI3 561 aa10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 JAZF1Q86VZ6 243 aa10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 PRKD2Q9BZL6 878 aa10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 SAP130Q9H0E3 1048 aa10.56□□□□□ -0.72
SMARCA2-250ENST00000636367 ACTN4O43707 911 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 BRD2P25440 801 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 PLCB3Q01970 1234 aa10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 GMLQ99445 158 aa10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 IGHA2P01877 340 aa10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 NBPF14Q5TI25 921 aa10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 DMGDHQ9UI17 866 aaKnown RBP10.55□□□□□ -0.72
SMARCA2-250ENST00000636367 WRNQ14191 1432 aaPredicted RBP eCLIP10.54□□□□□ -0.72
SMARCA2-250ENST00000636367 CCNYL3P0C7X3 344 aa10.54□□□□□ -0.72
SMARCA2-250ENST00000636367 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
SMARCA2-250ENST00000636367 KLHL42Q9P2K6 505 aa10.54□□□□□ -0.72
SMARCA2-250ENST00000636367 FZD6O60353 706 aa10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 GPKOWQ92917 476 aaPredicted RBP eCLIP10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 SYNJ1O43426 1573 aa10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 GABBR2O75899 941 aa10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 FAM9AQ8IZU1 332 aaPredicted RBP10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 ARMC5Q96C12 935 aa10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
SMARCA2-250ENST00000636367 FGD5Q6ZNL6 1462 aa10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 RACK1P63244 317 aaKnown RBP10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 AAMPQ13685 434 aa10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 ARMC2Q8NEN0 867 aa10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 EVA1BQ9NVM1 165 aa10.52□□□□□ -0.73
SMARCA2-250ENST00000636367 EIF1AXP47813 144 aaKnown RBP10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 RBL2Q08999 1139 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 PTPROQ16827 1216 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 THAP11Q96EK4 314 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 RAD54L2Q9Y4B4 1467 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 ARID5AQ03989 594 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 SH3BP5LQ7L8J4 393 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 COL26A1Q96A83 441 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 NUDT12Q9BQG2 462 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 OSBPL2Q9H1P3 480 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 PCDHB11Q9Y5F2 797 aa10.51□□□□□ -0.73
SMARCA2-250ENST00000636367 hCG_2014768A0A024R1R8 64 aa10.5□□□□□ -0.73
SMARCA2-250ENST00000636367 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-250ENST00000636367 ZNF358Q9NW07 568 aa10.5□□□□□ -0.73
SMARCA2-250ENST00000636367 MRPL42Q9Y6G3 142 aaKnown RBP10.5□□□□□ -0.73
SMARCA2-250ENST00000636367 TOP2BQ02880 1626 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 PNMA6FA0A0J9YX94 578 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 STAU1O95793 577 aaKnown RBP10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 ATP2B2Q01814 1243 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 ZNF746Q6NUN9 644 aaPredicted RBP10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 MCF2L2Q86YR7 1114 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 KCNH8Q96L42 1107 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 DMRTB1Q96MA1 342 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 FAM129BQ96TA1 746 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 NIF3L1Q9GZT8 377 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 PRDM9Q9NQV7 894 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 PPME1Q9Y570 386 aa10.49□□□□□ -0.73
SMARCA2-250ENST00000636367 ZNF608Q9ULD9 1512 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 SOGA1O94964 1423 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 IFT140Q96RY7 1462 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 CTSHP09668 335 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 IGBP1P78318 339 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 SCUBE3Q8IX30 993 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 CHMP7Q8WUX9 453 aaPredicted RBP10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 BIVM-ERCC5R4GMW8 1640 aa10.48□□□□□ -0.73
SMARCA2-250ENST00000636367 ESPNB1AK53 854 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 IGFBP4P22692 258 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 DDX41Q9UJV9 622 aaKnown RBP10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 M0R2N6 131 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 FOXO3O43524 673 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 USP4Q13107 963 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 KCNB2Q92953 911 aa10.47□□□□□ -0.73
SMARCA2-250ENST00000636367 DMRTA1Q5VZB9 504 aa10.46□□□□□ -0.74
SMARCA2-250ENST00000636367 ATCAYQ86WG3 371 aa10.46□□□□□ -0.74
SMARCA2-250ENST00000636367 TNS4Q8IZW8 715 aa10.46□□□□□ -0.74
SMARCA2-250ENST00000636367 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
SMARCA2-250ENST00000636367 FGD1P98174 961 aa10.45□□□□□ -0.74
SMARCA2-250ENST00000636367 C16orf46Q6P387 395 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms