RNA–Protein interactions for RNA: ENST00000636146.1

SYNGAP1-212, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 161 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-212ENST00000636146 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.7
SYNGAP1-212ENST00000636146 MORC1Q86VD1 984 aa10.65□□□□□ -0.7
SYNGAP1-212ENST00000636146 RBM42Q9BTD8 480 aaKnown RBP10.65□□□□□ -0.7
SYNGAP1-212ENST00000636146 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 ITGB4P16144 1822 aa10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 YBX3P16989 372 aaKnown RBP eCLIP10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 CABP4P57796 275 aa10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 EIF4A2Q14240 407 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 ASAP1Q9ULH1 1129 aa10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 RTCBQ9Y3I0 505 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
SYNGAP1-212ENST00000636146 AMOTQ4VCS5 1084 aa10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 ZNF530Q6P9A1 599 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 LINC00116Q8NCU8 138 aa10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 GPBP1L1Q9HC44 474 aaPredicted RBP10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 WWC3Q9ULE0 1092 aa10.63□□□□□ -0.71
SYNGAP1-212ENST00000636146 COL24A1Q17RW2 1714 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 ERVV-2B6SEH9 535 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 RFC4P35249 363 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 MTHFSP49914 203 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 ZNF526Q8TF50 670 aaPredicted RBP10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 DCAF5Q96JK2 942 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 TAF1LQ8IZX4 1826 aa10.62□□□□□ -0.71
SYNGAP1-212ENST00000636146 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
SYNGAP1-212ENST00000636146 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
SYNGAP1-212ENST00000636146 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
SYNGAP1-212ENST00000636146 NLGN1Q8N2Q7 840 aa10.61□□□□□ -0.71
SYNGAP1-212ENST00000636146 ATG3Q9NT62 314 aa10.61□□□□□ -0.71
SYNGAP1-212ENST00000636146 MMP10P09238 476 aa10.6□□□□□ -0.71
SYNGAP1-212ENST00000636146 ITPK1Q13572 414 aa10.6□□□□□ -0.71
SYNGAP1-212ENST00000636146 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
SYNGAP1-212ENST00000636146 NCAPD2Q15021 1401 aa10.59□□□□□ -0.71
SYNGAP1-212ENST00000636146 PTCD1O75127 700 aaKnown RBP10.59□□□□□ -0.71
SYNGAP1-212ENST00000636146 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
SYNGAP1-212ENST00000636146 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
SYNGAP1-212ENST00000636146 PLEKHG2Q9H7P9 1386 aa10.59□□□□□ -0.71
SYNGAP1-212ENST00000636146 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 UBR3Q6ZT12 1888 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 ADRA2BP18089 450 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 SULT6B1Q6IMI4 303 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 AMIGO3Q86WK7 504 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 BCS1LQ9Y276 419 aa10.58□□□□□ -0.72
SYNGAP1-212ENST00000636146 CC2D1BQ5T0F9 858 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-212ENST00000636146 RC3H1Q5TC82 1133 aaKnown RBP10.57□□□□□ -0.72
SYNGAP1-212ENST00000636146 UTRNP46939 3433 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 RPS6KA4O75676 772 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 TGFB2P61812 414 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 CNTNAP4Q9C0A0 1308 aa10.56□□□□□ -0.72
SYNGAP1-212ENST00000636146 FCHSD2O94868 740 aa10.55□□□□□ -0.72
SYNGAP1-212ENST00000636146 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-212ENST00000636146 AEBP1Q8IUX7 1158 aa10.55□□□□□ -0.72
SYNGAP1-212ENST00000636146 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
SYNGAP1-212ENST00000636146 ZPR1O75312 459 aa10.54□□□□□ -0.72
SYNGAP1-212ENST00000636146 PPP2R1AP30153 589 aa10.54□□□□□ -0.72
SYNGAP1-212ENST00000636146 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
SYNGAP1-212ENST00000636146 AKAP4Q5JQC9 854 aa10.53□□□□□ -0.72
SYNGAP1-212ENST00000636146 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
SYNGAP1-212ENST00000636146 KDRP35968 1356 aa10.52□□□□□ -0.72
SYNGAP1-212ENST00000636146 KDM6AO15550 1401 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 DIAPH1O60610 1272 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 HMOX1P09601 288 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 GYS1P13807 737 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 DPEP1P16444 411 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 NPM2Q86SE8 214 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 C16orf71Q8IYS4 520 aaPredicted RBP10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 CFAP53Q96M91 514 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 SLC4A9Q96Q91 983 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 PIM2Q9P1W9 311 aa10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 GOLGB1Q14789 3259 aaKnown RBP10.52□□□□□ -0.73
SYNGAP1-212ENST00000636146 IL13P35225 146 aa10.51□□□□□ -0.73
SYNGAP1-212ENST00000636146 DALRD3Q5D0E6 543 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-212ENST00000636146 TTC5Q8N0Z6 440 aa10.51□□□□□ -0.73
SYNGAP1-212ENST00000636146 U2SURPO15042 1029 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 HSPA6P17066 643 aa10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 PNISRQ8TF01 805 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 SLC52A2Q9HAB3 445 aa10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 SRP68Q9UHB9 627 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 ZNF831Q5JPB2 1677 aa10.5□□□□□ -0.73
SYNGAP1-212ENST00000636146 PXDNLA1KZ92 1463 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 NPHP1O15259 732 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 FKBP8Q14318 412 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 WDR43Q15061 677 aaKnown RBP eCLIP10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 USP42Q9H9J4 1324 aaKnown RBP10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 C4AP0C0L4 1744 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 C10orf71Q711Q0 1435 aa10.49□□□□□ -0.73
SYNGAP1-212ENST00000636146 COL5A3P25940 1745 aaPredicted RBP10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 RNMTO43148 476 aaKnown RBP10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 STARD3NLO95772 234 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 TEFQ10587 303 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 SLC39A6Q13433 755 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 USPL1Q5W0Q7 1092 aa10.48□□□□□ -0.73
SYNGAP1-212ENST00000636146 NGEFQ8N5V2 710 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms