RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 PHACTR2O75167 634 aa13.57□□□□□ -0.24
TCF4-276ENST00000635822 SLU7O95391 586 aaKnown RBP13.57□□□□□ -0.24
TCF4-276ENST00000635822 CEP57Q86XR8 500 aa13.57□□□□□ -0.24
TCF4-276ENST00000635822 TANGO6Q9C0B7 1094 aa13.57□□□□□ -0.24
TCF4-276ENST00000635822 PCDHB15Q9Y5E8 787 aa13.57□□□□□ -0.24
TCF4-276ENST00000635822 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
TCF4-276ENST00000635822 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
TCF4-276ENST00000635822 GJB2P29033 226 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 MYRIPQ8NFW9 859 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
TCF4-276ENST00000635822 PIP4K2AP48426 406 aaPredicted RBP13.56□□□□□ -0.24
TCF4-276ENST00000635822 MX1P20591 662 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 TXLNAP40222 546 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 EIF5P55010 431 aaKnown RBP13.55□□□□□ -0.24
TCF4-276ENST00000635822 TRIM27P14373 513 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 TMX3Q96JJ7 454 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 ERBINQ96RT1 1412 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 MCM3P25205 808 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 STX1AQ16623 288 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 CFAP70Q5T0N1 1121 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 CFTRP13569 1480 aa13.55□□□□□ -0.24
TCF4-276ENST00000635822 TSHZ3Q63HK5 1081 aa13.54□□□□□ -0.24
TCF4-276ENST00000635822 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
TCF4-276ENST00000635822 BMP2KLQ5H9B9 411 aa13.54□□□□□ -0.24
TCF4-276ENST00000635822 CCDC91Q7Z6B0 441 aa13.54□□□□□ -0.24
TCF4-276ENST00000635822 DDX19AQ9NUU7 478 aaKnown RBP13.54□□□□□ -0.24
TCF4-276ENST00000635822 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
TCF4-276ENST00000635822 THUMPD2Q9BTF0 503 aaKnown RBP13.54□□□□□ -0.24
TCF4-276ENST00000635822 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
TCF4-276ENST00000635822 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
TCF4-276ENST00000635822 GTF2E1P29083 439 aaPredicted RBP13.53□□□□□ -0.24
TCF4-276ENST00000635822 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 AACSQ86V21 672 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 LUC7LQ9NQ29 371 aaKnown RBP13.53□□□□□ -0.24
TCF4-276ENST00000635822 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.245e-7■■■■■ 29.7
TCF4-276ENST00000635822 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 HSP90AA4PQ58FG1 418 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 PLEKHH2Q8IVE3 1493 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 PPFIA3O75145 1194 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 TMPOP42166 694 aaKnown RBP13.53□□□□□ -0.24
TCF4-276ENST00000635822 STIM1Q13586 685 aa13.53□□□□□ -0.24
TCF4-276ENST00000635822 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
TCF4-276ENST00000635822 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.24
TCF4-276ENST00000635822 GOPCQ9HD26 462 aa13.52□□□□□ -0.24
TCF4-276ENST00000635822 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 A0A1B0GUL7 405 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 CTAGE5O15320 804 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 RAB11FIP3O75154 756 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
TCF4-276ENST00000635822 NUP88Q99567 741 aaPredicted RBP13.52□□□□□ -0.25
TCF4-276ENST00000635822 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
TCF4-276ENST00000635822 VPS37DQ86XT2 251 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 SNX21Q969T3 373 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 GBP6Q6ZN66 633 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 SCLT1Q96NL6 688 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 SART3Q15020 963 aaKnown RBP13.51□□□□□ -0.25
TCF4-276ENST00000635822 DNAJC21Q5F1R6 531 aaKnown RBP13.51□□□□□ -0.25
TCF4-276ENST00000635822 RPAP2Q8IXW5 612 aaPredicted RBP13.51□□□□□ -0.25
TCF4-276ENST00000635822 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
TCF4-276ENST00000635822 HLTFQ14527 1009 aaKnown RBP eCLIP13.5□□□□□ -0.25
TCF4-276ENST00000635822 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 FAM200AQ8TCP9 573 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 BCL2L12Q9HB09 334 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 SCAPERQ9BY12 1400 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 SPECC1Q5M775 1068 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 LUZP1Q86V48 1076 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 CCDC175P0C221 793 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 ZSCAN22P10073 491 aaPredicted RBP13.5□□□□□ -0.25
TCF4-276ENST00000635822 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 HFM1A2PYH4 1435 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 SLC3A2P08195 630 aaKnown RBP13.5□□□□□ -0.25
TCF4-276ENST00000635822 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
TCF4-276ENST00000635822 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 SPA17Q15506 151 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 SMC5Q8IY18 1101 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 TAF4BQ92750 862 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
TCF4-276ENST00000635822 OTUD6BQ8N6M0 293 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 DMTNQ08495 405 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 EZRP15311 586 aaKnown RBP13.49□□□□□ -0.25
TCF4-276ENST00000635822 DNM1Q05193 864 aaKnown RBP13.49□□□□□ -0.25
TCF4-276ENST00000635822 TCEAL9Q9UHQ7 104 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 AMOTL1Q8IY63 956 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
TCF4-276ENST00000635822 EBAG9O00559 213 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 HSPA4P34932 840 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 ERICH3Q5RHP9 1530 aa13.49□□□□□ -0.25
TCF4-276ENST00000635822 CCT2P78371 535 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms